Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL20P78556 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL20P78556 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 IRX1P1-201ENST00000438849 1838 ntBASIC15.15■□□□□ 0.02
CCL20P78556 AC073592.3-201ENST00000625118 1834 ntBASIC15.15■□□□□ 0.02
CCL20P78556 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL20P78556 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCL20P78556 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL20P78556 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL20P78556 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.14■□□□□ 0.01
CCL20P78556 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 PHGDH-210ENST00000641115 1638 ntBASIC15.14■□□□□ 0.01
CCL20P78556 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL20P78556 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL20P78556 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCL20P78556 MIR4767-201ENST00000582827 78 ntBASIC15.14■□□□□ 0.01
CCL20P78556 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 MIR4466-201ENST00000606121 54 ntBASIC15.14■□□□□ 0.01
CCL20P78556 AL031963.3-201ENST00000606441 850 ntBASIC15.14■□□□□ 0.01
CCL20P78556 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 AC080080.1-201ENST00000625121 2420 ntBASIC15.14■□□□□ 0.01
CCL20P78556 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCL20P78556 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL20P78556 KRT87P-202ENST00000534226 1464 ntBASIC15.14■□□□□ 0.01
CCL20P78556 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CCL20P78556 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL20P78556 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCL20P78556 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.13■□□□□ 0.01
CCL20P78556 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL20P78556 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL20P78556 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.13■□□□□ 0.01
CCL20P78556 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 AC134043.2-201ENST00000624206 2238 ntBASIC15.13■□□□□ 0.01
CCL20P78556 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCL20P78556 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL20P78556 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL20P78556 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 AC087633.2-202ENST00000565166 1439 ntBASIC15.12■□□□□ 0.01
CCL20P78556 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms