Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
RPS4XP62701 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RPS4XP62701 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RPS4XP62701 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.36■□□□□ 0.37
RPS4XP62701 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RPS4XP62701 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.36■□□□□ 0.37
RPS4XP62701 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4XP62701 Z99916.2-201ENST00000604037 246 ntBASIC17.36■□□□□ 0.37
RPS4XP62701 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.36■□□□□ 0.37
RPS4XP62701 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RPS4XP62701 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4XP62701 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4XP62701 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RPS4XP62701 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RPS4XP62701 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4XP62701 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RPS4XP62701 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RPS4XP62701 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4XP62701 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4XP62701 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 SNORA78-201ENST00000459373 127 ntBASIC17.35■□□□□ 0.37
RPS4XP62701 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4XP62701 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.35■□□□□ 0.37
RPS4XP62701 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.35■□□□□ 0.37
RPS4XP62701 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RPS4XP62701 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.35■□□□□ 0.37
RPS4XP62701 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RPS4XP62701 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 AC006333.2-201ENST00000607957 2099 ntBASIC17.35■□□□□ 0.37
RPS4XP62701 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4XP62701 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4XP62701 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.34■□□□□ 0.37
RPS4XP62701 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 AC239809.2-201ENST00000415381 517 ntBASIC17.34■□□□□ 0.37
RPS4XP62701 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4XP62701 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.34■□□□□ 0.37
RPS4XP62701 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.34■□□□□ 0.37
RPS4XP62701 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4XP62701 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.34■□□□□ 0.37
RPS4XP62701 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.34■□□□□ 0.37
RPS4XP62701 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4XP62701 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RPS4XP62701 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RPS4XP62701 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.34■□□□□ 0.37
RPS4XP62701 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms