Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN6P56747 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN6P56747 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 CA15P1-201ENST00000481698 905 ntBASIC18.46■□□□□ 0.55
CLDN6P56747 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN6P56747 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN6P56747 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN6P56747 AL691432.3-201ENST00000621860 400 ntBASIC18.46■□□□□ 0.55
CLDN6P56747 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN6P56747 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN6P56747 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN6P56747 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN6P56747 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN6P56747 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN6P56747 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN6P56747 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN6P56747 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 FEM1AP1-201ENST00000431297 1995 ntBASIC18.45■□□□□ 0.54
CLDN6P56747 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN6P56747 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN6P56747 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN6P56747 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN6P56747 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN6P56747 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN6P56747 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN6P56747 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 SLC25A24-204ENST00000569674 2357 ntBASIC18.45■□□□□ 0.54
CLDN6P56747 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN6P56747 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN6P56747 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
CLDN6P56747 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 MIR4674-201ENST00000582457 87 ntBASIC18.44■□□□□ 0.54
CLDN6P56747 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN6P56747 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN6P56747 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN6P56747 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN6P56747 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN6P56747 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN6P56747 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 AP000347.1-202ENST00000435868 847 ntBASIC18.43■□□□□ 0.54
CLDN6P56747 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN6P56747 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN6P56747 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms