Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.73■□□□□ 0.75
ITGA8P53708 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.73■□□□□ 0.75
ITGA8P53708 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.73■□□□□ 0.75
ITGA8P53708 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ITGA8P53708 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.73■□□□□ 0.75
ITGA8P53708 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.73■□□□□ 0.75
ITGA8P53708 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.73■□□□□ 0.75
ITGA8P53708 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ITGA8P53708 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.73■□□□□ 0.75
ITGA8P53708 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ITGA8P53708 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.73■□□□□ 0.75
ITGA8P53708 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA8P53708 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA8P53708 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
ITGA8P53708 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 KRT8P8-201ENST00000434750 1448 ntBASIC19.72■□□□□ 0.75
ITGA8P53708 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGA8P53708 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.72■□□□□ 0.75
ITGA8P53708 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGA8P53708 AC080038.1-201ENST00000611274 1154 ntBASIC19.72■□□□□ 0.75
ITGA8P53708 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 AC073111.5-205ENST00000641717 521 ntBASIC19.72■□□□□ 0.75
ITGA8P53708 AC135050.7-201ENST00000624508 2218 ntBASIC19.72■□□□□ 0.75
ITGA8P53708 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITGA8P53708 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA8P53708 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ITGA8P53708 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.71■□□□□ 0.75
ITGA8P53708 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA8P53708 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA8P53708 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.71■□□□□ 0.75
ITGA8P53708 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ITGA8P53708 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA8P53708 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA8P53708 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA8P53708 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 AL390961.4-201ENST00000623958 2535 ntBASIC19.7■□□□□ 0.74
ITGA8P53708 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ITGA8P53708 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA8P53708 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGA8P53708 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGA8P53708 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA8P53708 AP006587.1-201ENST00000534129 1502 ntBASIC19.7■□□□□ 0.74
ITGA8P53708 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ITGA8P53708 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA8P53708 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA8P53708 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGA8P53708 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA8P53708 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.69■□□□□ 0.74
ITGA8P53708 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA8P53708 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA8P53708 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA8P53708 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA8P53708 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA8P53708 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms