Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CTSKP43235 RNF152P1-201ENST00000397754 604 ntBASIC19.13■□□□□ 0.65
CTSKP43235 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.13■□□□□ 0.65
CTSKP43235 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.13■□□□□ 0.65
CTSKP43235 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.13■□□□□ 0.65
CTSKP43235 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.13■□□□□ 0.65
CTSKP43235 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 MYC-208ENST00000641036 567 ntBASIC19.13■□□□□ 0.65
CTSKP43235 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.13■□□□□ 0.65
CTSKP43235 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CTSKP43235 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTSKP43235 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTSKP43235 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CTSKP43235 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
CTSKP43235 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTSKP43235 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 AC092338.2-201ENST00000568827 1415 ntBASIC19.12■□□□□ 0.65
CTSKP43235 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.12■□□□□ 0.65
CTSKP43235 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.12■□□□□ 0.65
CTSKP43235 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 AL023803.3-201ENST00000615559 522 ntBASIC19.12■□□□□ 0.65
CTSKP43235 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.12■□□□□ 0.65
CTSKP43235 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSKP43235 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSKP43235 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CTSKP43235 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CTSKP43235 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CTSKP43235 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CTSKP43235 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTSKP43235 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.11■□□□□ 0.65
CTSKP43235 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.11■□□□□ 0.65
CTSKP43235 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.11■□□□□ 0.65
CTSKP43235 YBX1P2-201ENST00000489612 999 ntBASIC19.11■□□□□ 0.65
CTSKP43235 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 AC091076.1-201ENST00000610741 619 ntBASIC19.11■□□□□ 0.65
CTSKP43235 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSKP43235 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.11■□□□□ 0.65
CTSKP43235 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTSKP43235 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.11■□□□□ 0.65
CTSKP43235 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSKP43235 BX119927.1-201ENST00000636596 1552 ntBASIC19.1■□□□□ 0.65
CTSKP43235 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms