Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2CP42773 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2CP42773 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.18■□□□□ 0.5
CDKN2CP42773 KRT18P16-201ENST00000510337 1294 ntBASIC18.18■□□□□ 0.5
CDKN2CP42773 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2CP42773 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.18■□□□□ 0.5
CDKN2CP42773 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2CP42773 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDKN2CP42773 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2CP42773 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDKN2CP42773 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2CP42773 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 AC007613.1-201ENST00000572811 2597 ntBASIC18.17■□□□□ 0.5
CDKN2CP42773 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.17■□□□□ 0.5
CDKN2CP42773 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2CP42773 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 SOX15-203ENST00000570788 1093 ntBASIC18.17■□□□□ 0.5
CDKN2CP42773 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.17■□□□□ 0.5
CDKN2CP42773 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CDKN2CP42773 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2CP42773 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 AL031598.1-201ENST00000561511 1773 ntBASIC18.17■□□□□ 0.5
CDKN2CP42773 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2CP42773 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDKN2CP42773 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2CP42773 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.16■□□□□ 0.5
CDKN2CP42773 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.16■□□□□ 0.5
CDKN2CP42773 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDKN2CP42773 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.16■□□□□ 0.5
CDKN2CP42773 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.16■□□□□ 0.5
CDKN2CP42773 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDKN2CP42773 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKN2CP42773 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKN2CP42773 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDKN2CP42773 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2CP42773 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2CP42773 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKN2CP42773 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKN2CP42773 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2CP42773 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKN2CP42773 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CDKN2CP42773 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2CP42773 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms