Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.53■■□□□ 1.52
ATP6V1AP38606 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6V1AP38606 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.52■■□□□ 1.52
ATP6V1AP38606 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V1AP38606 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.51■■□□□ 1.51
ATP6V1AP38606 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.51■■□□□ 1.51
ATP6V1AP38606 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
ATP6V1AP38606 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
ATP6V1AP38606 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.51■■□□□ 1.51
ATP6V1AP38606 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V1AP38606 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 TSSC2-201ENST00000450217 709 ntBASIC24.5■■□□□ 1.51
ATP6V1AP38606 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 AC034232.1-201ENST00000506026 1064 ntBASIC24.5■■□□□ 1.51
ATP6V1AP38606 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6V1AP38606 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V1AP38606 AP005212.1-201ENST00000581547 1997 ntBASIC24.49■■□□□ 1.51
ATP6V1AP38606 AL512408.1-201ENST00000569378 2000 ntBASIC24.49■■□□□ 1.51
ATP6V1AP38606 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
ATP6V1AP38606 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.49■■□□□ 1.51
ATP6V1AP38606 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.49■■□□□ 1.51
ATP6V1AP38606 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.49■■□□□ 1.51
ATP6V1AP38606 AC011498.5-201ENST00000592027 486 ntBASIC24.49■■□□□ 1.51
ATP6V1AP38606 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 AC016734.2-201ENST00000624325 1377 ntBASIC24.49■■□□□ 1.51
ATP6V1AP38606 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
ATP6V1AP38606 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V1AP38606 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V1AP38606 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V1AP38606 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 AL845331.1-201ENST00000424978 1190 ntBASIC24.48■■□□□ 1.51
ATP6V1AP38606 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 AC073314.1-201ENST00000568729 2216 ntBASIC24.48■■□□□ 1.51
ATP6V1AP38606 MIR3180-1-201ENST00000580374 94 ntBASIC24.48■■□□□ 1.51
ATP6V1AP38606 MIR3180-3-201ENST00000584616 94 ntBASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms