Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ERCC2P18074 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC2P18074 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.8■□□□□ 0.76
ERCC2P18074 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.8■□□□□ 0.76
ERCC2P18074 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC2P18074 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC2P18074 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.8■□□□□ 0.76
ERCC2P18074 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC2P18074 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 KRT8P41-201ENST00000533985 1514 ntBASIC19.8■□□□□ 0.76
ERCC2P18074 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC2P18074 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ERCC2P18074 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 KRT16P1-201ENST00000399124 1418 ntBASIC19.79■□□□□ 0.76
ERCC2P18074 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 RPS2P55-201ENST00000397318 883 ntBASIC19.79■□□□□ 0.76
ERCC2P18074 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ERCC2P18074 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.79■□□□□ 0.76
ERCC2P18074 AC107956.1-201ENST00000494359 873 ntBASIC19.79■□□□□ 0.76
ERCC2P18074 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.79■□□□□ 0.76
ERCC2P18074 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.79■□□□□ 0.76
ERCC2P18074 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.79■□□□□ 0.76
ERCC2P18074 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC2P18074 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ERCC2P18074 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.78■□□□□ 0.76
ERCC2P18074 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.78■□□□□ 0.76
ERCC2P18074 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ERCC2P18074 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ERCC2P18074 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC2P18074 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC2P18074 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 FAM197Y1-201ENST00000421178 764 ntBASIC19.77■□□□□ 0.76
ERCC2P18074 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.77■□□□□ 0.76
ERCC2P18074 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.77■□□□□ 0.76
ERCC2P18074 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 Z99916.2-201ENST00000604037 246 ntBASIC19.77■□□□□ 0.76
ERCC2P18074 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC2P18074 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC2P18074 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC2P18074 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.77■□□□□ 0.75
ERCC2P18074 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
ERCC2P18074 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC2P18074 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
ERCC2P18074 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ERCC2P18074 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 AC012618.2-201ENST00000428058 849 ntBASIC19.76■□□□□ 0.75
ERCC2P18074 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.76■□□□□ 0.75
ERCC2P18074 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.76■□□□□ 0.75
ERCC2P18074 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.76■□□□□ 0.75
ERCC2P18074 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ERCC2P18074 AC233702.5-201ENST00000584107 538 ntBASIC19.76■□□□□ 0.75
ERCC2P18074 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.76■□□□□ 0.75
ERCC2P18074 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms