Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
CSF1P09603 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 Z98044.1-201ENST00000632503 1764 ntBASIC16.61■□□□□ 0.25
CSF1P09603 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 KRT8P20-201ENST00000423953 1409 ntBASIC16.61■□□□□ 0.25
CSF1P09603 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSF1P09603 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSF1P09603 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSF1P09603 LTB4R2-202ENST00000528054 3092 ntBASIC16.6■□□□□ 0.25
CSF1P09603 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 AL031598.1-201ENST00000561511 1773 ntBASIC16.6■□□□□ 0.25
CSF1P09603 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.6■□□□□ 0.25
CSF1P09603 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 KRT18P20-201ENST00000548986 1279 ntBASIC16.6■□□□□ 0.25
CSF1P09603 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.6■□□□□ 0.25
CSF1P09603 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.6■□□□□ 0.25
CSF1P09603 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CSF1P09603 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSF1P09603 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSF1P09603 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CSF1P09603 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 BICD1-207ENST00000551848 1962 ntBASIC16.59■□□□□ 0.25
CSF1P09603 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CSF1P09603 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.59■□□□□ 0.25
CSF1P09603 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.59■□□□□ 0.25
CSF1P09603 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.59■□□□□ 0.25
CSF1P09603 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 AC069152.1-201ENST00000438030 544 ntBASIC16.59■□□□□ 0.25
CSF1P09603 GUSBP6-202ENST00000438529 1198 ntBASIC16.59■□□□□ 0.25
CSF1P09603 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.59■□□□□ 0.25
CSF1P09603 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 AC105036.2-201ENST00000569468 176 ntBASIC16.59■□□□□ 0.25
CSF1P09603 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.59■□□□□ 0.25
CSF1P09603 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.59■□□□□ 0.25
CSF1P09603 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CSF1P09603 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.59■□□□□ 0.25
CSF1P09603 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 AC093525.10-201ENST00000625130 1569 ntBASIC16.59■□□□□ 0.25
CSF1P09603 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSF1P09603 NOC2LP2-201ENST00000407594 1944 ntBASIC16.58■□□□□ 0.25
CSF1P09603 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.58■□□□□ 0.25
CSF1P09603 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.58■□□□□ 0.25
CSF1P09603 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1P09603 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1P09603 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSF1P09603 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CSF1P09603 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSF1P09603 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CSF1P09603 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.58■□□□□ 0.24
CSF1P09603 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CSF1P09603 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms