Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.11■□□□□ 0.01
CSN3P07498 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 TNXA-203ENST00000507684 2038 ntBASIC15.11■□□□□ 0.01
CSN3P07498 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.11■□□□□ 0.01
CSN3P07498 AL158047.1-201ENST00000445918 881 ntBASIC15.11■□□□□ 0.01
CSN3P07498 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.11■□□□□ 0.01
CSN3P07498 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.11■□□□□ 0.01
CSN3P07498 RPPH1-201ENST00000516869 333 ntBASIC15.11■□□□□ 0.01
CSN3P07498 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.11■□□□□ 0.01
CSN3P07498 AL121829.2-201ENST00000620908 328 ntBASIC15.11■□□□□ 0.01
CSN3P07498 AL359736.2-201ENST00000621992 437 ntBASIC15.11■□□□□ 0.01
CSN3P07498 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CSN3P07498 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 AL162377.1-201ENST00000618844 1793 ntBASIC15.11■□□□□ 0.01
CSN3P07498 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSN3P07498 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSN3P07498 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CSN3P07498 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.1■□□□□ 0.01
CSN3P07498 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.1■□□□□ 0.01
CSN3P07498 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CSN3P07498 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CSN3P07498 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CSN3P07498 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSN3P07498 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.1■□□□□ 0.01
CSN3P07498 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.09■□□□□ 0.01
CSN3P07498 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.09■□□□□ 0.01
CSN3P07498 PRKY-204ENST00000533551 1019 ntBASIC15.09■□□□□ 0.01
CSN3P07498 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.09■□□□□ 0.01
CSN3P07498 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.09■□□□□ 0.01
CSN3P07498 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.09■□□□□ 0.01
CSN3P07498 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 AL121906.2-201ENST00000621597 723 ntBASIC15.09■□□□□ 0.01
CSN3P07498 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.09■□□□□ 0.01
CSN3P07498 AL023875.1-201ENST00000640777 796 ntBASIC15.09■□□□□ 0.01
CSN3P07498 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.09■□□□□ 0.01
CSN3P07498 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSN3P07498 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSN3P07498 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSN3P07498 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CSN3P07498 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSN3P07498 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSN3P07498 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSN3P07498 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CSN3P07498 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSN3P07498 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms