Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 AC107956.1-201ENST00000494359 873 ntBASIC19.52■□□□□ 0.72
HLA-DQB2P05538 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DQB2P05538 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 AC233702.5-201ENST00000584107 538 ntBASIC19.51■□□□□ 0.71
HLA-DQB2P05538 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 Z99916.2-201ENST00000604037 246 ntBASIC19.51■□□□□ 0.71
HLA-DQB2P05538 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 AL161938.1-201ENST00000569833 2180 ntBASIC19.51■□□□□ 0.71
HLA-DQB2P05538 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HLA-DQB2P05538 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 AC012618.2-201ENST00000428058 849 ntBASIC19.5■□□□□ 0.71
HLA-DQB2P05538 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 AC113410.3-201ENST00000623366 203 ntBASIC19.5■□□□□ 0.71
HLA-DQB2P05538 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 AL049812.1-201ENST00000432563 2267 ntBASIC19.5■□□□□ 0.71
HLA-DQB2P05538 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB2P05538 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 AC008550.1-201ENST00000511500 884 ntBASIC19.49■□□□□ 0.71
HLA-DQB2P05538 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 CD177P1-201ENST00000606252 935 ntBASIC19.49■□□□□ 0.71
HLA-DQB2P05538 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 RCC2P6-201ENST00000526625 1557 ntBASIC19.49■□□□□ 0.71
HLA-DQB2P05538 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB2P05538 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 IRX1P1-201ENST00000438849 1838 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms