Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.59■□□□□ 0.41
P04436 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.59■□□□□ 0.41
P04436 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.59■□□□□ 0.41
P04436 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.59■□□□□ 0.41
P04436 AC128688.1-201ENST00000487626 519 ntBASIC17.59■□□□□ 0.41
P04436 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.59■□□□□ 0.41
P04436 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.59■□□□□ 0.41
P04436 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.59■□□□□ 0.41
P04436 AC010947.1-201ENST00000623454 693 ntBASIC17.59■□□□□ 0.41
P04436 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
P04436 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
P04436 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.58■□□□□ 0.41
P04436 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04436 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.58■□□□□ 0.4
P04436 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.58■□□□□ 0.4
P04436 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.58■□□□□ 0.4
P04436 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
P04436 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
P04436 AC104417.2-201ENST00000562989 1793 ntBASIC17.58■□□□□ 0.4
P04436 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
P04436 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.58■□□□□ 0.4
P04436 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04436 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.57■□□□□ 0.4
P04436 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 KRT8P41-201ENST00000533985 1514 ntBASIC17.57■□□□□ 0.4
P04436 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.57■□□□□ 0.4
P04436 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.57■□□□□ 0.4
P04436 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 HCG11-201ENST00000411553 5696 ntBASIC17.57■□□□□ 0.4
P04436 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.57■□□□□ 0.4
P04436 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
P04436 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 AC005363.2-201ENST00000618631 242 ntBASIC17.57■□□□□ 0.4
P04436 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.57■□□□□ 0.4
P04436 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
P04436 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.57■□□□□ 0.4
P04436 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
P04436 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04436 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
P04436 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.56■□□□□ 0.4
P04436 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.56■□□□□ 0.4
P04436 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.56■□□□□ 0.4
P04436 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
P04436 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.56■□□□□ 0.4
P04436 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.56■□□□□ 0.4
P04436 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.56■□□□□ 0.4
P04436 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.56■□□□□ 0.4
P04436 EGLN1P1-201ENST00000531623 762 ntBASIC17.56■□□□□ 0.4
P04436 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
P04436 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.56■□□□□ 0.4
P04436 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.56■□□□□ 0.4
P04436 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
P04436 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
P04436 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P04436 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P04436 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.56■□□□□ 0.4
P04436 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.56■□□□□ 0.4
P04436 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04436 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms