Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.95■□□□□ 0.46
PDGFAP04085 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDGFAP04085 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFAP04085 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.95■□□□□ 0.46
PDGFAP04085 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFAP04085 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFAP04085 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.95■□□□□ 0.46
PDGFAP04085 MFAP1P1-201ENST00000442257 1255 ntBASIC17.95■□□□□ 0.46
PDGFAP04085 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFAP04085 LINC01238-205ENST00000567549 1107 ntBASIC17.95■□□□□ 0.46
PDGFAP04085 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PDGFAP04085 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFAP04085 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFAP04085 AL121894.2-201ENST00000602977 491 ntBASIC17.95■□□□□ 0.46
PDGFAP04085 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 RNF152P1-201ENST00000397754 604 ntBASIC17.94■□□□□ 0.46
PDGFAP04085 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PDGFAP04085 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 YBX1P2-201ENST00000489612 999 ntBASIC17.94■□□□□ 0.46
PDGFAP04085 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.94■□□□□ 0.46
PDGFAP04085 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDGFAP04085 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFAP04085 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDGFAP04085 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDGFAP04085 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 KRT16P6-202ENST00000425692 1426 ntBASIC17.93■□□□□ 0.46
PDGFAP04085 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDGFAP04085 AC004951.3-201ENST00000418645 1148 ntBASIC17.93■□□□□ 0.46
PDGFAP04085 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.93■□□□□ 0.46
PDGFAP04085 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFAP04085 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDGFAP04085 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFAP04085 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFAP04085 AC116562.4-202ENST00000641738 218 ntBASIC17.93■□□□□ 0.46
PDGFAP04085 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms