Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZIC3O60481 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZIC3O60481 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.33■□□□□ 0.36
ZIC3O60481 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.33■□□□□ 0.36
ZIC3O60481 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 CKBP1-201ENST00000565489 1086 ntBASIC17.33■□□□□ 0.36
ZIC3O60481 AC010947.1-201ENST00000623454 693 ntBASIC17.33■□□□□ 0.36
ZIC3O60481 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZIC3O60481 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
ZIC3O60481 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZIC3O60481 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZIC3O60481 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
ZIC3O60481 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZIC3O60481 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
ZIC3O60481 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.32■□□□□ 0.36
ZIC3O60481 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZIC3O60481 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.32■□□□□ 0.36
ZIC3O60481 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
ZIC3O60481 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.32■□□□□ 0.36
ZIC3O60481 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.32■□□□□ 0.36
ZIC3O60481 AC012306.2-201ENST00000609350 630 ntBASIC17.32■□□□□ 0.36
ZIC3O60481 AC133561.5-201ENST00000635547 218 ntBASIC17.32■□□□□ 0.36
ZIC3O60481 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZIC3O60481 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.32■□□□□ 0.36
ZIC3O60481 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZIC3O60481 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZIC3O60481 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZIC3O60481 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC3O60481 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZIC3O60481 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
ZIC3O60481 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC3O60481 TSPY21P-201ENST00000433481 731 ntBASIC17.31■□□□□ 0.36
ZIC3O60481 TSPY23P-201ENST00000440136 739 ntBASIC17.31■□□□□ 0.36
ZIC3O60481 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 PRSS44-201ENST00000515154 1146 ntBASIC17.31■□□□□ 0.36
ZIC3O60481 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.31■□□□□ 0.36
ZIC3O60481 NAPSB-206ENST00000562112 1266 ntBASIC17.31■□□□□ 0.36
ZIC3O60481 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 AC097493.4-201ENST00000641197 219 ntBASIC17.31■□□□□ 0.36
ZIC3O60481 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ZIC3O60481 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC3O60481 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC3O60481 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZIC3O60481 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC3O60481 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.3■□□□□ 0.36
ZIC3O60481 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC3O60481 AC007952.6-201ENST00000573168 2673 ntBASIC17.3■□□□□ 0.36
ZIC3O60481 AC003957.1-201ENST00000625108 2673 ntBASIC17.3■□□□□ 0.36
ZIC3O60481 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 ECEL1P3-201ENST00000427961 737 ntBASIC17.3■□□□□ 0.36
ZIC3O60481 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.3■□□□□ 0.36
ZIC3O60481 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC3O60481 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.3■□□□□ 0.36
ZIC3O60481 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC3O60481 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZIC3O60481 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC3O60481 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.3■□□□□ 0.36
ZIC3O60481 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms