Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NBPF21P-201ENST00000425093 1451 ntBASIC21.58■■□□□ 1.05
ACTN4O43707 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.58■■□□□ 1.05
ACTN4O43707 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ACTN4O43707 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.58■■□□□ 1.05
ACTN4O43707 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.58■■□□□ 1.05
ACTN4O43707 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ACTN4O43707 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
ACTN4O43707 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.58■■□□□ 1.05
ACTN4O43707 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
ACTN4O43707 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.58■■□□□ 1.05
ACTN4O43707 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ACTN4O43707 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.58■■□□□ 1.04
ACTN4O43707 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
ACTN4O43707 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ACTN4O43707 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ACTN4O43707 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ACTN4O43707 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ACTN4O43707 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ACTN4O43707 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ACTN4O43707 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.57■■□□□ 1.04
ACTN4O43707 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ACTN4O43707 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.57■■□□□ 1.04
ACTN4O43707 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 C1QL1P1-201ENST00000568105 661 ntBASIC21.57■■□□□ 1.04
ACTN4O43707 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.57■■□□□ 1.04
ACTN4O43707 HLA-A-209ENST00000638375 975 ntBASIC21.57■■□□□ 1.04
ACTN4O43707 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.57■■□□□ 1.04
ACTN4O43707 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACTN4O43707 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.57■■□□□ 1.04
ACTN4O43707 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.56■■□□□ 1.04
ACTN4O43707 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ACTN4O43707 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
ACTN4O43707 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ACTN4O43707 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 AC026366.1-201ENST00000488803 879 ntBASIC21.56■■□□□ 1.04
ACTN4O43707 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.56■■□□□ 1.04
ACTN4O43707 PRKY-204ENST00000533551 1019 ntBASIC21.56■■□□□ 1.04
ACTN4O43707 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ACTN4O43707 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.56■■□□□ 1.04
ACTN4O43707 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.56■■□□□ 1.04
ACTN4O43707 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACTN4O43707 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
ACTN4O43707 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ACTN4O43707 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
ACTN4O43707 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.55■■□□□ 1.04
ACTN4O43707 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.55■■□□□ 1.04
ACTN4O43707 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.55■■□□□ 1.04
ACTN4O43707 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
ACTN4O43707 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ACTN4O43707 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACTN4O43707 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
ACTN4O43707 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms