Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 CRYGFP-201ENST00000418459 633 ntBASIC21.65■■□□□ 1.06
CHMP2AO43633 AC097488.1-201ENST00000507834 756 ntBASIC21.65■■□□□ 1.06
CHMP2AO43633 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CHMP2AO43633 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHMP2AO43633 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2AO43633 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2AO43633 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHMP2AO43633 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP2AO43633 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CHMP2AO43633 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.64■■□□□ 1.06
CHMP2AO43633 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP2AO43633 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.64■■□□□ 1.06
CHMP2AO43633 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.64■■□□□ 1.06
CHMP2AO43633 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CHMP2AO43633 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CHMP2AO43633 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 AC211429.1-201ENST00000415277 523 ntBASIC21.64■■□□□ 1.05
CHMP2AO43633 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CHMP2AO43633 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.64■■□□□ 1.05
CHMP2AO43633 AC133561.5-201ENST00000635547 218 ntBASIC21.64■■□□□ 1.05
CHMP2AO43633 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHMP2AO43633 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2AO43633 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP2AO43633 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMP2AO43633 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHMP2AO43633 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP2AO43633 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 Z82202.1-201ENST00000623446 1880 ntBASIC21.63■■□□□ 1.05
CHMP2AO43633 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 ECEL1P3-201ENST00000427961 737 ntBASIC21.63■■□□□ 1.05
CHMP2AO43633 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.63■■□□□ 1.05
CHMP2AO43633 AP000692.2-201ENST00000608391 879 ntBASIC21.63■■□□□ 1.05
CHMP2AO43633 DGCR10-201ENST00000609839 495 ntBASIC21.63■■□□□ 1.05
CHMP2AO43633 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP2AO43633 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2AO43633 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CHMP2AO43633 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP2AO43633 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 FITM1-202ENST00000559294 800 ntBASIC21.62■■□□□ 1.05
CHMP2AO43633 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP2AO43633 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP2AO43633 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.62■■□□□ 1.05
CHMP2AO43633 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP2AO43633 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2AO43633 AC007952.6-201ENST00000573168 2673 ntBASIC21.62■■□□□ 1.05
CHMP2AO43633 AC003957.1-201ENST00000625108 2673 ntBASIC21.62■■□□□ 1.05
CHMP2AO43633 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.61■■□□□ 1.05
CHMP2AO43633 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 CYP2D8P-201ENST00000433633 1490 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms