Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.35■■□□□ 1.65
APAF1O14727 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.35■■□□□ 1.65
APAF1O14727 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.35■■□□□ 1.65
APAF1O14727 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APAF1O14727 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APAF1O14727 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
APAF1O14727 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC25.35■■□□□ 1.65
APAF1O14727 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC25.35■■□□□ 1.65
APAF1O14727 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
APAF1O14727 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
APAF1O14727 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC25.34■■□□□ 1.65
APAF1O14727 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.34■■□□□ 1.65
APAF1O14727 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
APAF1O14727 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.34■■□□□ 1.65
APAF1O14727 MIR718-201ENST00000390190 70 ntBASIC25.34■■□□□ 1.65
APAF1O14727 SNORA78-201ENST00000459373 127 ntBASIC25.34■■□□□ 1.65
APAF1O14727 B3GAT3P1-201ENST00000471720 806 ntBASIC25.34■■□□□ 1.65
APAF1O14727 NUDT16P1-203ENST00000513809 620 ntBASIC25.34■■□□□ 1.65
APAF1O14727 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.34■■□□□ 1.65
APAF1O14727 AP001412.1-201ENST00000608405 714 ntBASIC25.34■■□□□ 1.65
APAF1O14727 AC130371.2-201ENST00000619443 611 ntBASIC25.34■■□□□ 1.65
APAF1O14727 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC25.34■■□□□ 1.65
APAF1O14727 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC25.34■■□□□ 1.65
APAF1O14727 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
APAF1O14727 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
APAF1O14727 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC25.33■■□□□ 1.65
APAF1O14727 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
APAF1O14727 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
APAF1O14727 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.33■■□□□ 1.65
APAF1O14727 TSPY23P-201ENST00000440136 739 ntBASIC25.33■■□□□ 1.65
APAF1O14727 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.33■■□□□ 1.65
APAF1O14727 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.33■■□□□ 1.65
APAF1O14727 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC25.33■■□□□ 1.65
APAF1O14727 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.33■■□□□ 1.65
APAF1O14727 AC026271.3-201ENST00000571884 352 ntBASIC25.33■■□□□ 1.65
APAF1O14727 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
APAF1O14727 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.33■■□□□ 1.65
APAF1O14727 MIR6786-201ENST00000616843 113 ntBASIC25.33■■□□□ 1.65
APAF1O14727 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.33■■□□□ 1.65
APAF1O14727 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
APAF1O14727 AL049812.1-201ENST00000432563 2267 ntBASIC25.33■■□□□ 1.64
APAF1O14727 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC25.32■■□□□ 1.64
APAF1O14727 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
APAF1O14727 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
APAF1O14727 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.32■■□□□ 1.64
APAF1O14727 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
APAF1O14727 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.32■■□□□ 1.64
APAF1O14727 AC116562.2-201ENST00000507042 360 ntBASIC25.32■■□□□ 1.64
APAF1O14727 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.32■■□□□ 1.64
APAF1O14727 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.32■■□□□ 1.64
APAF1O14727 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.32■■□□□ 1.64
APAF1O14727 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
APAF1O14727 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.32■■□□□ 1.64
APAF1O14727 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APAF1O14727 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.31■■□□□ 1.64
APAF1O14727 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 AC004951.3-201ENST00000418645 1148 ntBASIC25.31■■□□□ 1.64
APAF1O14727 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.31■■□□□ 1.64
APAF1O14727 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 AC026471.5-201ENST00000615068 467 ntBASIC25.31■■□□□ 1.64
APAF1O14727 REXO1L10P-201ENST00000615707 1290 ntBASIC25.31■■□□□ 1.64
APAF1O14727 AC011298.2-201ENST00000617989 482 ntBASIC25.31■■□□□ 1.64
APAF1O14727 REXO1L12P-201ENST00000622156 912 ntBASIC25.31■■□□□ 1.64
APAF1O14727 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.31■■□□□ 1.64
APAF1O14727 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.31■■□□□ 1.64
APAF1O14727 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
APAF1O14727 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APAF1O14727 AL161938.1-201ENST00000569833 2180 ntBASIC25.31■■□□□ 1.64
APAF1O14727 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.31■■□□□ 1.64
APAF1O14727 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.3■■□□□ 1.64
APAF1O14727 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.3■■□□□ 1.64
APAF1O14727 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APAF1O14727 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms