Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.35■□□□□ 0.53
RTCAO00442 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTCAO00442 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.34■□□□□ 0.53
RTCAO00442 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.34■□□□□ 0.53
RTCAO00442 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.34■□□□□ 0.53
RTCAO00442 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RTCAO00442 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.34■□□□□ 0.53
RTCAO00442 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RTCAO00442 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 AP000974.1-201ENST00000623909 2387 ntBASIC18.34■□□□□ 0.53
RTCAO00442 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RTCAO00442 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.34■□□□□ 0.53
RTCAO00442 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RTCAO00442 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTCAO00442 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.34■□□□□ 0.53
RTCAO00442 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTCAO00442 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.33■□□□□ 0.53
RTCAO00442 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTCAO00442 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTCAO00442 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.33■□□□□ 0.53
RTCAO00442 AC098818.2-201ENST00000564925 2320 ntBASIC18.33■□□□□ 0.53
RTCAO00442 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
RTCAO00442 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.33■□□□□ 0.53
RTCAO00442 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
RTCAO00442 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.33■□□□□ 0.52
RTCAO00442 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTCAO00442 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.33■□□□□ 0.52
RTCAO00442 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTCAO00442 RPS2P4-201ENST00000476944 856 ntBASIC18.33■□□□□ 0.52
RTCAO00442 AP002982.1-201ENST00000492365 877 ntBASIC18.33■□□□□ 0.52
RTCAO00442 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.33■□□□□ 0.52
RTCAO00442 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.33■□□□□ 0.52
RTCAO00442 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.33■□□□□ 0.52
RTCAO00442 AL160286.2-201ENST00000567150 934 ntBASIC18.33■□□□□ 0.52
RTCAO00442 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.33■□□□□ 0.52
RTCAO00442 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.33■□□□□ 0.52
RTCAO00442 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RTCAO00442 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.33■□□□□ 0.52
RTCAO00442 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.33■□□□□ 0.52
RTCAO00442 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTCAO00442 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RTCAO00442 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RTCAO00442 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.32■□□□□ 0.52
RTCAO00442 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.32■□□□□ 0.52
RTCAO00442 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.32■□□□□ 0.52
RTCAO00442 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 TMEM191A-211ENST00000637163 1067 ntBASIC18.32■□□□□ 0.52
RTCAO00442 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 AC141586.3-201ENST00000562166 1838 ntBASIC18.32■□□□□ 0.52
RTCAO00442 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTCAO00442 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTCAO00442 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms