Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 CA15P1-201ENST00000481698 905 ntBASIC19.05■□□□□ 0.64
TLR4O00206 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR4O00206 COX11P1-201ENST00000489116 835 ntBASIC19.05■□□□□ 0.64
TLR4O00206 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.05■□□□□ 0.64
TLR4O00206 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR4O00206 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
TLR4O00206 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TLR4O00206 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TLR4O00206 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR4O00206 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TLR4O00206 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TLR4O00206 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR4O00206 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR4O00206 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TLR4O00206 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR4O00206 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.04■□□□□ 0.64
TLR4O00206 FAM8A6P-201ENST00000407496 1135 ntBASIC19.04■□□□□ 0.64
TLR4O00206 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.04■□□□□ 0.64
TLR4O00206 TSPY5P-201ENST00000426936 936 ntBASIC19.04■□□□□ 0.64
TLR4O00206 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR4O00206 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.04■□□□□ 0.64
TLR4O00206 YBX1P2-201ENST00000489612 999 ntBASIC19.04■□□□□ 0.64
TLR4O00206 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.04■□□□□ 0.64
TLR4O00206 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TLR4O00206 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.04■□□□□ 0.64
TLR4O00206 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.04■□□□□ 0.64
TLR4O00206 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 AL512604.3-201ENST00000569583 964 ntBASIC19.04■□□□□ 0.64
TLR4O00206 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.04■□□□□ 0.64
TLR4O00206 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR4O00206 AC141257.4-201ENST00000634557 245 ntBASIC19.04■□□□□ 0.64
TLR4O00206 AC136944.6-201ENST00000634818 245 ntBASIC19.04■□□□□ 0.64
TLR4O00206 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TLR4O00206 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR4O00206 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR4O00206 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.03■□□□□ 0.64
TLR4O00206 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.03■□□□□ 0.64
TLR4O00206 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR4O00206 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR4O00206 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.03■□□□□ 0.64
TLR4O00206 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.03■□□□□ 0.64
TLR4O00206 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.03■□□□□ 0.64
TLR4O00206 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TLR4O00206 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TLR4O00206 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TLR4O00206 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR4O00206 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR4O00206 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.02■□□□□ 0.64
TLR4O00206 AC009237.14-201ENST00000609975 1594 ntBASIC19.02■□□□□ 0.64
TLR4O00206 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TLR4O00206 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR4O00206 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.02■□□□□ 0.64
TLR4O00206 KRT8P41-201ENST00000533985 1514 ntBASIC19.02■□□□□ 0.64
TLR4O00206 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.02■□□□□ 0.64
TLR4O00206 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 CKBP1-201ENST00000565489 1086 ntBASIC19.02■□□□□ 0.64
TLR4O00206 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.02■□□□□ 0.64
TLR4O00206 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR4O00206 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TLR4O00206 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TLR4O00206 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.02■□□□□ 0.63
TLR4O00206 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms