Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TSPY21P-201ENST00000433481 731 ntBASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.27■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 BX664615.1-201ENST00000443558 458 ntBASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF3-AMACRE9PGA6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms