Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 AC006058.3-201ENST00000606217 1069 ntBASIC19.47■□□□□ 0.71
CCDC78A2IDD5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 AC104417.2-201ENST00000562989 1793 ntBASIC19.47■□□□□ 0.71
CCDC78A2IDD5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
CCDC78A2IDD5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 KRASP1-201ENST00000407852 552 ntBASIC19.46■□□□□ 0.71
CCDC78A2IDD5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 TMEM191A-211ENST00000637163 1067 ntBASIC19.46■□□□□ 0.71
CCDC78A2IDD5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 AL020996.1-203ENST00000536896 2307 ntBASIC19.46■□□□□ 0.71
CCDC78A2IDD5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC78A2IDD5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 AC073648.6-201ENST00000641589 218 ntBASIC19.45■□□□□ 0.7
CCDC78A2IDD5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC78A2IDD5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.44■□□□□ 0.7
CCDC78A2IDD5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 AC239809.2-201ENST00000415381 517 ntBASIC19.44■□□□□ 0.7
CCDC78A2IDD5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms