Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 Z85996.1-201ENST00000494644 937 ntBASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 LINC01023-201ENST00000606054 436 ntBASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 SLC25A1P4-201ENST00000567977 778 ntBASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGHV4-28A0A0C4DH34 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
IGHV4-28A0A0C4DH34 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.9□□□□□ -0.19
IGHV4-28A0A0C4DH34 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 CRYGFP-201ENST00000418459 633 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 FAM207BP-201ENST00000447172 505 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC097488.1-201ENST00000507834 756 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 FITM1-202ENST00000559294 800 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC130371.2-201ENST00000619443 611 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms