Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-7A0A0A0MS04 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBV6-7A0A0A0MS04 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 CDCA4P2-201ENST00000441182 718 ntBASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC092437.1-201ENST00000624794 1048 ntBASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 Z98044.1-201ENST00000632503 1764 ntBASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-7A0A0A0MS04 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms