Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 Y_RNA.341-201ENST00000365341 102 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 RN7SKP292-201ENST00000365522 317 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 Y_RNA.432-201ENST00000384087 111 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SNORD116-22-201ENST00000384430 92 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 MIR487A-201ENST00000385009 80 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AL133388.1-201ENST00000404509 287 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SNRPEP6-201ENST00000407465 277 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 RNU2-55P-201ENST00000411146 174 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC099782.1-201ENST00000425889 474 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC125388.1-201ENST00000459631 156 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AL591473.1-201ENST00000464297 313 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 RN7SL221P-201ENST00000466190 281 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC010618.1-201ENST00000469924 477 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC005017.1-201ENST00000482002 490 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 RN7SL413P-201ENST00000482700 297 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SCARNA23-201ENST00000516060 130 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 IGHV7-34-1-201ENST00000519200 350 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC084364.2-201ENST00000546924 395 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AL160236.1-201ENST00000556317 195 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ACTG1P15-201ENST00000570019 1063 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC040162.2-201ENST00000573092 157 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC005972.2-201ENST00000604690 348 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AL590032.1-201ENST00000604920 252 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 OR2AH1P-202ENST00000641232 2744 ntBASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 FTO-222ENST00000637969 2889 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP9-3Q9BYQ3 ERG-210ENST00000442448 5034 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms