Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC006499.5-201ENST00000505037 514 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 HMGB3P13-201ENST00000511263 607 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AP001207.1-201ENST00000524051 481 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AP003392.2-201ENST00000527269 208 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 ZNF519P2-201ENST00000557032 169 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AP005205.1-201ENST00000563503 508 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC090186.1-201ENST00000605991 572 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC091946.2-201ENST00000606105 291 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC080013.4-201ENST00000607624 649 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC073544.1-201ENST00000600110 1595 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC107027.3-201ENST00000565095 3473 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC016716.1-201ENST00000265882 708 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 Y_RNA.18-201ENST00000362461 102 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 RNU6-452P-201ENST00000384406 107 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 RNY3P10-201ENST00000384764 102 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 SNORA48.7-201ENST00000391302 135 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 HSPD1P16-201ENST00000402302 394 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 RPL7L1P1-201ENST00000448259 785 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 TPT1P7-201ENST00000458300 517 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC138853.1-201ENST00000503549 823 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 OR4C2P-201ENST00000530855 1064 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC025627.2-201ENST00000576220 160 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 MIR548S-201ENST00000581352 82 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC020910.2-201ENST00000603635 610 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC106028.5-201ENST00000610332 395 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC011472.4-201ENST00000615848 491 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AC025048.6-202ENST00000627667 438 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 SEPT14P19-203ENST00000633205 211 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 AF001550.2-201ENST00000636643 217 ntBASIC4.91□□□□□ -1.62
SALL3Q9BXA9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SALL3Q9BXA9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SALL3Q9BXA9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SALL3Q9BXA9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SALL3Q9BXA9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.9□□□□□ -1.62
SALL3Q9BXA9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SALL3Q9BXA9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 OR4G2P-201ENST00000328113 903 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 RNU6-1339P-201ENST00000363574 91 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 RNU6-532P-201ENST00000384318 107 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 RNU1-13P-201ENST00000384499 162 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 MIR23B-201ENST00000384832 97 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 SNORD65.1-201ENST00000390889 71 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 ISCA1P1-201ENST00000426679 387 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 RSL24D1P6-201ENST00000426934 401 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 MTND3P21-201ENST00000433774 331 ntBASIC4.9□□□□□ -1.63
SALL3Q9BXA9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL3Q9BXA9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms