Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AL133383.2-201ENST00000622958 2336 ntBASIC3.76□□□□□ -1.81
PKP2Q99959 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKP2Q99959 TNPO1P3-201ENST00000436471 2662 ntBASIC3.76□□□□□ -1.81
PKP2Q99959 AC111188.2-201ENST00000529697 1387 ntBASIC3.76□□□□□ -1.81
PKP2Q99959 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.75□□□□□ -1.81
PKP2Q99959 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 AL023807.1-201ENST00000407932 359 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 MIR1251-201ENST00000408552 70 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 RNU6-575P-201ENST00000411326 105 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 ELOCP19-201ENST00000411919 318 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC127526.1-201ENST00000417526 366 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 HIGD1AP12-201ENST00000427832 281 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC006946.1-201ENST00000429106 328 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 TXNL1P1-201ENST00000429528 554 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 Z95327.1-201ENST00000446082 482 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 FABP3P2-201ENST00000453169 399 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.75□□□□□ -1.81
PKP2Q99959 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.75□□□□□ -1.81
PKP2Q99959 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.75□□□□□ -1.81
PKP2Q99959 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 IGKV2D-23-201ENST00000518179 286 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 OR4C2P-201ENST00000530855 1064 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC092747.2-201ENST00000545069 983 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.75□□□□□ -1.81
PKP2Q99959 MIR4644-201ENST00000579929 84 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC093227.2-201ENST00000589357 285 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC012409.3-201ENST00000611343 981 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKP2Q99959 VN1R7P-201ENST00000619242 903 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC091905.1-201ENST00000624400 311 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 OR1S1-201ENST00000624470 978 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 LINC02211-204ENST00000642024 1070 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
PKP2Q99959 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP2Q99959 OR56B2P-202ENST00000641377 2453 ntBASIC3.75□□□□□ -1.81
PKP2Q99959 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP2Q99959 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 MAPK10-373ENST00000641983 6772 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PKP2Q99959 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP2Q99959 RNU6-582P-201ENST00000362989 107 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 RNU6-1214P-201ENST00000363650 109 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PKP2Q99959 RNU6-339P-201ENST00000384310 107 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 SNORD116-23-201ENST00000384645 92 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PKP2Q99959 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.74□□□□□ -1.81
PKP2Q99959 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 HLFP1-201ENST00000402375 499 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP2Q99959 ELOCP9-201ENST00000418624 239 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 PTP4A1P5-201ENST00000420305 455 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 RPEP3-201ENST00000425462 676 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP2Q99959 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.74□□□□□ -1.81
PKP2Q99959 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 RPL23AP46-201ENST00000438548 490 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 CBX1P1-201ENST00000440184 427 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP2Q99959 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 DNAJC19P1-201ENST00000455312 319 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP2Q99959 TRBV26-201ENST00000456572 344 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 MTCO3P2-201ENST00000457365 171 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 AC010301.1-201ENST00000473936 355 ntBASIC3.74□□□□□ -1.81
PKP2Q99959 GAPDHP39-201ENST00000481866 979 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms