Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BNIP3P24-201ENST00000593398 557 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC022146.1-201ENST00000595307 847 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RPL23AP92-201ENST00000603609 255 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC009974.1-201ENST00000608881 455 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC092650.2-201ENST00000619984 902 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC004777.1-201ENST00000624317 287 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFT1Q96AA3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFT1Q96AA3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC139713.2-214ENST00000642059 1811 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 SNORA7.2-201ENST00000364446 145 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 RNU6-1242P-201ENST00000391052 103 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 HSPE1P26-201ENST00000405341 275 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AL050321.1-201ENST00000432363 400 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 CBX1P1-201ENST00000440184 427 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 ELOCP13-201ENST00000443934 329 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 NPM1P49-201ENST00000448027 714 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 TRGVB-201ENST00000453257 471 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 USP9YP34-201ENST00000453983 808 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 RPS15AP17-201ENST00000470598 390 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 HMGB1P28-201ENST00000507778 552 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC008958.1-201ENST00000511047 682 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC137768.1-201ENST00000549998 553 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC245036.5-201ENST00000596330 847 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 Z99289.3-201ENST00000605586 594 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 FAM27D1-201ENST00000612308 341 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC006963.1-201ENST00000624003 1052 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC068057.2-201ENST00000624047 895 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 AC009039.2-201ENST00000624524 529 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 MTND2P41-201ENST00000637599 773 ntBASIC3.53□□□□□ -1.84
RFT1Q96AA3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFT1Q96AA3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
RFT1Q96AA3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 CR381670.1-201ENST00000624291 1693 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC011933.1-201ENST00000413334 321 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 ELOCP9-201ENST00000418624 239 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFT1Q96AA3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AL035246.1-201ENST00000433554 1255 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 CYCSP43-201ENST00000438233 310 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC006011.1-201ENST00000442758 349 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 RPL39P6-201ENST00000448289 150 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AL445669.2-201ENST00000454425 421 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 RPS20P24-201ENST00000457473 361 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC116533.1-201ENST00000459748 321 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC026410.2-201ENST00000460281 156 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 RPL7P38-201ENST00000488396 739 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 OR4G11P-201ENST00000492842 939 ntBASIC3.52□□□□□ -1.85
RFT1Q96AA3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.52□□□□□ -1.85
RFT1Q96AA3 RN7SKP265-201ENST00000516448 223 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms