Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MTCYBP33-201ENST00000575007 1130 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AP001004.1-201ENST00000582468 324 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC008507.1-201ENST00000587506 734 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC090181.2-201ENST00000602975 672 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL354984.3-201ENST00000604803 325 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL009028.1-201ENST00000604895 802 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC245389.1-201ENST00000605141 529 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC107214.2-201ENST00000608204 634 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL021997.2-201ENST00000615674 271 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 AL031985.3-201ENST00000565390 2449 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 PABPC1P7-201ENST00000413177 1513 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 CR383658.2-201ENST00000547576 1525 ntBASIC4.36□□□□□ -1.71
HMGB4Q8WW32 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB4Q8WW32 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RNU4-21P-201ENST00000362802 126 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RNU6-777P-201ENST00000364265 104 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MIR554-201ENST00000384874 96 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC097374.1-203ENST00000400783 485 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL592291.1-201ENST00000403830 352 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RN7SKP202-201ENST00000410439 330 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC012065.2-201ENST00000421295 375 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RPL23AP25-201ENST00000430973 463 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MTCO2P16-201ENST00000436962 677 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL512286.1-201ENST00000439244 400 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC127537.2-201ENST00000439258 465 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 TAF9P1-201ENST00000445421 515 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RPL36AP33-201ENST00000450395 310 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 TAF9P2-201ENST00000454958 515 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MTND4LP3-201ENST00000468320 276 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RPS4XP15-201ENST00000489210 795 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 OR5H5P-201ENST00000503164 928 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MTCO3P44-201ENST00000510977 541 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RN7SKP46-201ENST00000515942 234 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RNU1-45P-201ENST00000517191 141 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 IGKV2D-36-201ENST00000518643 226 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC022861.1-201ENST00000522981 663 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC105233.3-201ENST00000531125 744 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 GTF2IP22-201ENST00000554443 182 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MIR4286-201ENST00000580651 93 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AP001180.3-201ENST00000582221 145 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 IMMP1LP1-201ENST00000605170 488 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 COX6CP4-201ENST00000605798 228 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AL008729.2-201ENST00000606393 473 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC091905.2-201ENST00000623143 306 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AP006248.2-201ENST00000623309 592 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MIR6715B-201ENST00000637172 77 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 ZNF734P-201ENST00000419494 1534 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.35□□□□□ -1.71
HMGB4Q8WW32 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB4Q8WW32 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGB4Q8WW32 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms