Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 LARP1BP1-201ENST00000506036 1359 ntBASIC5.02□□□□□ -1.61
NUP43Q8NFH3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP43Q8NFH3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC083837.1-201ENST00000565297 2994 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC073343.1-201ENST00000328239 651 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RNU6-249P-201ENST00000363016 102 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RNU6-254P-201ENST00000363377 107 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.146-201ENST00000363549 102 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 SNORA33.2-201ENST00000365413 134 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RNU4-48P-201ENST00000365559 182 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RNU6-1207P-201ENST00000384343 107 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 SNORD116-29-201ENST00000384516 83 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 SNORA48.4-201ENST00000391089 134 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 HSPA8P15-201ENST00000401676 786 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RPL5P18-201ENST00000406671 891 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RPL31P45-201ENST00000419532 356 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 Z82205.1-201ENST00000428456 297 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RPS20P5-201ENST00000434808 360 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC114495.1-201ENST00000441274 436 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 CEACAMP9-201ENST00000442990 513 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC012512.1-201ENST00000446594 718 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 NANOGP10-201ENST00000453325 895 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 HMGB1P15-201ENST00000453854 435 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.631-201ENST00000459607 101 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RN7SL629P-201ENST00000489622 285 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC022133.1-201ENST00000490961 571 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC005726.1-201ENST00000494679 427 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RPS24P16-201ENST00000497294 392 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC053481.3-201ENST00000577881 843 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 GLUD1P4-201ENST00000590914 418 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC104695.2-201ENST00000605056 775 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AP001521.2-201ENST00000608772 546 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 uc_338.12-201ENST00000616344 181 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 AC040168.1-201ENST00000623594 991 ntBASIC5.01□□□□□ -1.61
NUP43Q8NFH3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP43Q8NFH3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NUP43Q8NFH3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
NUP43Q8NFH3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 AC130650.2-201ENST00000618736 2403 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 MIR133B-201ENST00000362210 119 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.22-201ENST00000362492 102 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.100-201ENST00000363141 102 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.145-201ENST00000363527 102 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 RNA5SP234-201ENST00000363916 119 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.234-201ENST00000364409 97 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP43Q8NFH3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5□□□□□ -1.61
NUP43Q8NFH3 MIR143-201ENST00000385300 106 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AL583835.1-201ENST00000399570 407 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms