Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC234775.1-201ENST00000454247 670 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 RPS23P7-201ENST00000466210 444 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC068587.1-201ENST00000483613 781 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC055855.1-201ENST00000489563 579 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC010350.1-201ENST00000504908 231 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC017037.2-201ENST00000513850 890 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 CR383656.7-201ENST00000548164 174 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AP005432.2-201ENST00000608162 586 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC024941.1-201ENST00000612250 334 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC073534.2-201ENST00000620377 381 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC012150.2-201ENST00000621300 544 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC091953.2-201ENST00000623979 160 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC099654.2-201ENST00000433031 1980 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AC009902.3-201ENST00000606235 2172 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 AL139811.1-201ENST00000424779 2299 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.12□□□□□ -1.59
SYNPOQ8N3V7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 RNU6-1078P-201ENST00000364522 103 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC233728.2-201ENST00000425348 757 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 OR4K11P-201ENST00000431829 904 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AL139415.2-201ENST00000431968 163 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC093392.2-201ENST00000450682 337 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 snoU13.1-201ENST00000459157 104 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC146507.1-201ENST00000468335 354 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC126182.1-201ENST00000478134 357 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 Vault.3-201ENST00000516676 95 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 SETP7-201ENST00000552169 453 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC040958.1-201ENST00000561102 201 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC087481.2-201ENST00000565492 330 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 TVP23CP2-201ENST00000571473 623 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC136624.4-201ENST00000573044 370 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 MIR3118-1-201ENST00000581787 76 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC011626.1-201ENST00000604710 562 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 IGHV3-29-201ENST00000604817 344 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 AC006065.5-201ENST00000623427 349 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 CR381572.2-201ENST00000624852 397 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 BMS1P21-201ENST00000634565 365 ntBASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNPOQ8N3V7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 RNU5E-1-201ENST00000362477 120 ntBASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 RPL23AP32-201ENST00000395315 459 ntBASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 RNU4-55P-201ENST00000410731 137 ntBASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 BX510359.2-201ENST00000417920 305 ntBASIC5.1□□□□□ -1.59
SYNPOQ8N3V7 AF186996.5-201ENST00000418098 904 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms