Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 U6.98-201ENST00000637157 84 ntBASIC3.64□□□□□ -1.83
RFWD3Q6PCD5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFWD3Q6PCD5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFWD3Q6PCD5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 RPL31P12-201ENST00000422587 358 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC114973.1-201ENST00000429057 632 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 MTCYBP15-201ENST00000433123 1127 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 UBE2V1P5-201ENST00000440070 405 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 MRPL35P4-201ENST00000453682 566 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 DUXAP8-207ENST00000456786 622 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 HMGB1P21-201ENST00000502313 581 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC091860.1-201ENST00000505723 432 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 RN7SKP82-201ENST00000516786 223 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 IGJP1-201ENST00000522682 475 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC139103.1-201ENST00000534696 1030 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 DUXAP10-204ENST00000612052 616 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 VN1R74P-201ENST00000613259 503 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC084757.4-201ENST00000616350 526 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AP003355.3-201ENST00000623465 114 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC104985.3-201ENST00000623479 597 ntBASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFWD3Q6PCD5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AL049737.1-201ENST00000413920 1403 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 ANKRD36P1-201ENST00000344424 659 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RNA5SP50-201ENST00000363731 107 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 SNORA51.12-201ENST00000384448 134 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 U3.39-201ENST00000408569 239 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RNA5SP44-201ENST00000410446 133 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 MTND4P3-201ENST00000417829 541 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AL158071.1-201ENST00000430315 461 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RPL21P110-201ENST00000433345 446 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 MTND1P33-201ENST00000446251 917 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AL031313.1-201ENST00000448435 256 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RBMY2UP-201ENST00000453474 324 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 ACTG1P13-201ENST00000486987 1043 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC093752.1-206ENST00000511823 336 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC008494.2-201ENST00000514544 370 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC110760.3-202ENST00000515177 371 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 RNU6-579P-201ENST00000516879 102 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 LRRC6P1-201ENST00000532188 885 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 MTND1P8-201ENST00000571424 950 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC006270.2-201ENST00000578523 652 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 CCDC58P3-201ENST00000590792 430 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC112220.2-201ENST00000605513 533 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 MIR7851-201ENST00000610611 160 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC121761.2-201ENST00000617300 689 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 AC111188.2-201ENST00000529697 1387 ntBASIC3.62□□□□□ -1.83
RFWD3Q6PCD5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFWD3Q6PCD5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
RFWD3Q6PCD5 MIR153-1-201ENST00000384914 90 ntBASIC3.61□□□□□ -1.83
RFWD3Q6PCD5 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
RFWD3Q6PCD5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms