Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 TRBV8-1-201ENST00000481590 279 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 OR5AK3P-201ENST00000527486 1297 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC084757.1-201ENST00000559987 490 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 VN1R78P-201ENST00000597393 564 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC090953.1-201ENST00000604305 1092 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC114546.3-201ENST00000623582 1734 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CACNA1SQ13698 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 SNORD6-201ENST00000365444 73 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC105402.1-201ENST00000413336 545 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 RPL21P41-201ENST00000459863 264 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC008549.1-201ENST00000512900 643 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC107016.2-201ENST00000547968 190 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC007423.1-201ENST00000605009 627 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 AC007342.7-201ENST00000624610 2337 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1SQ13698 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 RNU1-87P-201ENST00000363727 170 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 RPL29P29-201ENST00000448725 423 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 RNU6-237P-201ENST00000515985 71 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 PDCL2P2-201ENST00000533651 189 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1SQ13698 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1SQ13698 AC004943.3-201ENST00000624116 600 ntBASIC3.38□□□□□ -1.87
CACNA1SQ13698 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CACNA1SQ13698 SNORD114-30-201ENST00000364448 72 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CACNA1SQ13698 MTND2P2-201ENST00000434633 945 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 RPL7P31-201ENST00000450192 724 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC008716.1-201ENST00000511084 513 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 SNORD53-201ENST00000579969 78 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AL360182.1-201ENST00000397433 468 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 RNA5SP508-201ENST00000411327 119 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 SNRPGP5-201ENST00000456003 220 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 AL392112.1-201ENST00000605115 829 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.37□□□□□ -1.87
CACNA1SQ13698 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CACNA1SQ13698 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1SQ13698 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC011155.1-201ENST00000316512 456 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1SQ13698 MIR512-1-201ENST00000384913 84 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 BTF3P7-201ENST00000407097 488 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 RNA5SP425-201ENST00000410336 112 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 MTND4LP13-201ENST00000425022 298 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC022022.1-201ENST00000430304 178 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AP000926.1-201ENST00000479573 241 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC078817.1-201ENST00000492623 435 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC068305.1-201ENST00000497406 726 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC118282.1-201ENST00000506408 765 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC119751.1-201ENST00000513357 765 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 RPL7P20-201ENST00000520308 745 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 AC004241.3-201ENST00000611728 517 ntBASIC3.36□□□□□ -1.87
CACNA1SQ13698 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1SQ13698 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1SQ13698 AL353743.4-201ENST00000422653 1547 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 Y_RNA.62-201ENST00000362840 99 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 RN7SKP192-201ENST00000411291 327 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
CACNA1SQ13698 AC104058.1-201ENST00000448028 297 ntBASIC3.35□□□□□ -1.87
CACNA1SQ13698 MTND2P17-201ENST00000550281 688 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms