Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH1Q08174 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH1Q08174 MIR4790-201ENST00000577799 79 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 MIR4503-201ENST00000582187 83 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH1Q08174 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 VN1R107P-201ENST00000601784 209 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 7SK.7-201ENST00000603504 247 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 AC022893.3-201ENST00000607665 437 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AL390240.1-201ENST00000612950 384 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RMST_9.1-201ENST00000619945 193 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 U6.114-201ENST00000636407 96 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 MIR1910-201ENST00000636955 80 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDH1Q08174 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 AP004607.3-201ENST00000530354 3915 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 AC109446.4-201ENST00000623235 2755 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AL606537.1-201ENST00000607258 2011 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 SMG1P7-201ENST00000565246 2704 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC121333.1-201ENST00000567488 2709 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 AL159987.1-201ENST00000347911 293 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 Y_RNA.112-201ENST00000363250 102 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 RNU6-179P-201ENST00000363350 107 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 SNORD113-7-201ENST00000363762 77 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 AC117470.1-201ENST00000381974 330 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 VTI1BP4-201ENST00000427516 527 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 BRWD1P3-201ENST00000428816 390 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 RPL21P133-201ENST00000443666 476 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 SNORD121B-201ENST00000458838 81 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 Y_RNA.653-201ENST00000459091 95 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC079804.1-201ENST00000461922 436 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC009120.1-201ENST00000493458 473 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 COX6CP5-201ENST00000527162 228 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 DEFB109D-201ENST00000529497 240 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 OR5D15P-201ENST00000531671 942 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AP000857.1-201ENST00000532151 543 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
PCDH1Q08174 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH1Q08174 NF1P5-201ENST00000588287 448 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AC023813.4-201ENST00000607580 580 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AP001486.3-201ENST00000615334 372 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH1Q08174 AC087588.2-201ENST00000617667 426 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 AC011155.2-201ENST00000623202 216 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH1Q08174 OR52H1-202ENST00000641796 1061 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH1Q08174 MTND5P10-201ENST00000603719 1809 ntBASIC5.52□□□□□ -1.53
PCDH1Q08174 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH1Q08174 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH1Q08174 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH1Q08174 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH1Q08174 MTND4P1-201ENST00000457501 1466 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 ADAM24P-201ENST00000398655 2101 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH1Q08174 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDH1Q08174 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH1Q08174 RPL32P3-201ENST00000359025 275 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 RNU6-1188P-201ENST00000363795 107 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 RNU1-130P-201ENST00000363930 160 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 RNA5SP435-201ENST00000364044 108 ntBASIC5.51□□□□□ -1.53
PCDH1Q08174 RN7SKP81-201ENST00000365603 331 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms