Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC138749.5-201ENST00000611461 208 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL049539.1-201ENST00000611964 459 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC092794.1-201ENST00000612734 582 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC116165.2-201ENST00000616705 206 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL139089.1-201ENST00000620372 975 ntBASIC4.23□□□□□ -1.73
RAE1P78406 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RAE1P78406 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RAE1P78406 MAPK10-349ENST00000641767 3661 ntBASIC4.23□□□□□ -1.73
RAE1P78406 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
RAE1P78406 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RAE1P78406 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 AC097714.1-201ENST00000511272 1647 ntBASIC4.22□□□□□ -1.73
RAE1P78406 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 AC067945.1-201ENST00000342609 618 ntBASIC4.22□□□□□ -1.73
RAE1P78406 RNVU1-6-201ENST00000364688 164 ntBASIC4.22□□□□□ -1.73
RAE1P78406 RPL31P1-201ENST00000398116 372 ntBASIC4.22□□□□□ -1.73
RAE1P78406 BTBD10P2-201ENST00000404779 676 ntBASIC4.22□□□□□ -1.73
RAE1P78406 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 MTCO1P17-201ENST00000411522 491 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 SNRPFP1-201ENST00000414761 252 ntBASIC4.22□□□□□ -1.73
RAE1P78406 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 RPL7AP25-201ENST00000423357 805 ntBASIC4.22□□□□□ -1.73
RAE1P78406 NPM1P34-201ENST00000428821 893 ntBASIC4.22□□□□□ -1.73
RAE1P78406 OR2B8P-201ENST00000432841 938 ntBASIC4.22□□□□□ -1.73
RAE1P78406 SKP1P1-201ENST00000438081 489 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 HSPE1P28-201ENST00000443139 211 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.22□□□□□ -1.73
RAE1P78406 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 HMGB3P21-201ENST00000452483 547 ntBASIC4.22□□□□□ -1.73
RAE1P78406 BTF3P5-201ENST00000457252 467 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC093899.1-201ENST00000457984 376 ntBASIC4.22□□□□□ -1.73
RAE1P78406 snoU109.1-201ENST00000459339 135 ntBASIC4.22□□□□□ -1.73
RAE1P78406 PLGLA-201ENST00000465668 449 ntBASIC4.22□□□□□ -1.73
RAE1P78406 RN7SL354P-201ENST00000469282 294 ntBASIC4.22□□□□□ -1.73
RAE1P78406 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 RPL9P33-201ENST00000484311 566 ntBASIC4.22□□□□□ -1.73
RAE1P78406 HMGB1P36-201ENST00000487709 576 ntBASIC4.22□□□□□ -1.73
RAE1P78406 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.22□□□□□ -1.73
RAE1P78406 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AC008694.2-201ENST00000517591 306 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 AP000827.1-201ENST00000527814 258 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 RN7SL52P-201ENST00000584271 284 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.22□□□□□ -1.73
RAE1P78406 AL353997.4-201ENST00000586196 166 ntBASIC4.22□□□□□ -1.73
RAE1P78406 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 MIR6780A-201ENST00000615089 68 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
RAE1P78406 MIR7703-201ENST00000620784 77 ntBASIC4.22□□□□□ -1.73
RAE1P78406 AL049536.1-201ENST00000625043 744 ntBASIC4.22□□□□□ -1.73
RAE1P78406 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.22□□□□□ -1.73
RAE1P78406 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAE1P78406 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.22□□□□□ -1.73
RAE1P78406 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
RAE1P78406 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RAE1P78406 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RAE1P78406 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAE1P78406 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.21□□□□□ -1.74
RAE1P78406 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.21□□□□□ -1.74
RAE1P78406 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAE1P78406 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.21□□□□□ -1.74
RAE1P78406 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RAE1P78406 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RAE1P78406 RNU6-744P-201ENST00000365557 107 ntBASIC4.21□□□□□ -1.74
RAE1P78406 RNU6-1316P-201ENST00000384242 108 ntBASIC4.21□□□□□ -1.74
RAE1P78406 RNU6-878P-201ENST00000384578 110 ntBASIC4.21□□□□□ -1.74
RAE1P78406 RPS20P14-201ENST00000412545 360 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms