Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC069306.1-201ENST00000507006 843 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC008885.2-201ENST00000509506 930 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNA1P78396 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC022080.3-201ENST00000544433 482 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 MIR5047-201ENST00000579212 100 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC093732.2-201ENST00000607950 274 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC138932.5-201ENST00000617759 563 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 AC022149.2-201ENST00000621061 203 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 PLCE1P1-201ENST00000622094 305 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCNA1P78396 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNA1P78396 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
CCNA1P78396 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC107081.3-201ENST00000612715 2034 ntBASIC3.77□□□□□ -1.81
CCNA1P78396 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNA1P78396 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 ELL2P4-201ENST00000446870 1376 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 ZNF37BP-203ENST00000452306 1352 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 MTND4P34-201ENST00000572715 1371 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.76□□□□□ -1.81
CCNA1P78396 AL672296.1-201ENST00000427780 2158 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
CCNA1P78396 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCNA1P78396 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNA1P78396 SNORD115-48-201ENST00000364764 76 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 RNU6-40P-201ENST00000384254 107 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCNA1P78396 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNA1P78396 SFR1P1-201ENST00000403720 688 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AL158071.1-201ENST00000430315 461 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 MTCYBP31-201ENST00000438855 1122 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 RPL23AP15-201ENST00000450202 459 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCNA1P78396 UBE2DNL-203ENST00000474922 222 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 MTCO3P35-201ENST00000485582 781 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNA1P78396 MTCO2P32-201ENST00000514865 403 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AP001207.1-201ENST00000524051 481 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AC006518.1-201ENST00000541449 943 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 SYF2P1-201ENST00000550658 413 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNA1P78396 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNA1P78396 MIR4504-201ENST00000577413 92 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AC006254.3-201ENST00000603353 884 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 STMN1P1-201ENST00000617809 440 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNA1P78396 AC018926.3-201ENST00000618841 406 ntBASIC3.76□□□□□ -1.81
CCNA1P78396 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCNA1P78396 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNA1P78396 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNA1P78396 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNA1P78396 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNA1P78396 AL513302.2-201ENST00000562313 1842 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC005183.1-201ENST00000603687 1979 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNA1P78396 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNA1P78396 RNU6-837P-201ENST00000391056 108 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 RPL5P18-201ENST00000406671 891 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 RPL23AP47-201ENST00000408017 460 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 UBE2V1P11-201ENST00000411559 285 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC126124.2-201ENST00000413542 321 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 LIPT1P1-201ENST00000415870 1186 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNA1P78396 ZNF965P-201ENST00000432501 817 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AL353705.1-201ENST00000433468 480 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC068135.1-201ENST00000446164 246 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNA1P78396 SLC31A1P1-201ENST00000451221 567 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC233982.1-201ENST00000451247 436 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 MRPL35P4-201ENST00000453682 566 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.75□□□□□ -1.81
CCNA1P78396 AP000893.1-201ENST00000474462 794 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNA1P78396 RNF138P1-201ENST00000502765 546 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 HMGB3P15-201ENST00000507326 574 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNA1P78396 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.75□□□□□ -1.81
CCNA1P78396 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNA1P78396 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNA1P78396 AC027104.1-201ENST00000563702 681 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC099489.2-201ENST00000574976 260 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC091488.1-201ENST00000604239 660 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC025016.1-201ENST00000616746 682 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 SNORD39.4-201ENST00000620099 78 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AC018692.3-201ENST00000623929 123 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AL136164.4-201ENST00000625013 2135 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNA1P78396 AC083865.1-201ENST00000636634 831 ntBASIC3.75□□□□□ -1.81
CCNA1P78396 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNA1P78396 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.75□□□□□ -1.81
CCNA1P78396 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.75□□□□□ -1.81
CCNA1P78396 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms