Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC103881.1-201ENST00000603476 538 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AC011816.2-201ENST00000607089 556 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 RMST_10.1-201ENST00000616309 154 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLDN18P56856 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN18P56856 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN18P56856 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN18P56856 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN18P56856 OR6K3-202ENST00000368146 996 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 RNU6-441P-201ENST00000384545 106 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 RNU6-796P-201ENST00000391086 107 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 RNA5SP56-201ENST00000410277 118 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 RN7SKP111-201ENST00000410349 271 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN18P56856 OSTCP5-201ENST00000425293 453 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN18P56856 HMGN3P1-201ENST00000453847 193 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC010468.1-201ENST00000461022 817 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN18P56856 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 HMGB1P22-201ENST00000505315 124 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC074250.1-201ENST00000511117 192 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN18P56856 AC019227.1-201ENST00000526902 510 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 OR4A45P-201ENST00000529954 901 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN18P56856 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN18P56856 UBE2NP1-201ENST00000545592 458 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN18P56856 DUXAP6-201ENST00000553858 601 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC095057.3-201ENST00000567102 1157 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN18P56856 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN18P56856 VN1R88P-201ENST00000596787 292 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC079880.2-201ENST00000603790 1213 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC016877.3-201ENST00000606778 504 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC100814.1-201ENST00000606963 623 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC021851.1-201ENST00000608537 1082 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AL354976.1-201ENST00000613843 387 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AL163051.2-201ENST00000618976 735 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC020923.1-201ENST00000624021 917 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN18P56856 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN18P56856 AL645937.1-201ENST00000641739 1652 ntBASIC3.11□□□□□ -1.91
CLDN18P56856 AC068647.1-201ENST00000489539 2265 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN18P56856 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN18P56856 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN18P56856 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN18P56856 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN18P56856 HSFY4P-201ENST00000415994 1181 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN18P56856 AC073508.1-201ENST00000428866 656 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AC005019.1-201ENST00000436455 431 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 RPL17P49-201ENST00000443728 411 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN18P56856 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN18P56856 PLGLA-201ENST00000465668 449 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 RPS3AP50-201ENST00000487064 803 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 MTCO3P44-201ENST00000510977 541 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN18P56856 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN18P56856 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN18P56856 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN18P56856 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AL355812.1-201ENST00000603215 216 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 OR4H6P-202ENST00000603819 340 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 AC012468.1-201ENST00000604888 430 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 BNIP3P4-201ENST00000604946 565 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.1□□□□□ -1.91
CLDN18P56856 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN18P56856 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN18P56856 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN18P56856 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms