Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 PCMTD1P2-201ENST00000565017 355 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 RPL26P30-202ENST00000602923 645 ntBASIC4.64□□□□□ -1.67
NEK3P51956 MTCYBP22-201ENST00000603788 447 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC106028.5-201ENST00000610332 395 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC015813.4-201ENST00000610469 179 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.64□□□□□ -1.67
NEK3P51956 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 MAPK10-286ENST00000641208 8747 ntBASIC4.64□□□□□ -1.67
NEK3P51956 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 MTND4P26-201ENST00000415971 1359 ntBASIC4.64□□□□□ -1.67
NEK3P51956 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.64□□□□□ -1.67
NEK3P51956 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.64□□□□□ -1.67
NEK3P51956 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.64□□□□□ -1.67
NEK3P51956 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 AC021146.4-201ENST00000309229 279 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 RNY4P24-201ENST00000362735 96 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RNU6-744P-201ENST00000365557 107 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RNU6-1181P-201ENST00000384191 106 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RNU6-1316P-201ENST00000384242 108 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RPS3AP26-201ENST00000398259 784 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 AL137014.1-201ENST00000420490 1226 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AC090960.1-201ENST00000421072 306 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RPEP3-201ENST00000425462 676 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RPL18P10-201ENST00000425606 538 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NEK3P51956 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.63□□□□□ -1.67
NEK3P51956 MTND1P9-201ENST00000453775 944 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 AC010469.1-201ENST00000463864 576 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RPS3AP43-201ENST00000479743 781 ntBASIC4.63□□□□□ -1.67
NEK3P51956 RPL31P13-201ENST00000484151 370 ntBASIC4.63□□□□□ -1.67
NEK3P51956 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.63□□□□□ -1.67
NEK3P51956 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 RNU6-1095P-201ENST00000516148 108 ntBASIC4.63□□□□□ -1.67
NEK3P51956 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 AC092851.1-201ENST00000535964 478 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.63□□□□□ -1.67
NEK3P51956 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.63□□□□□ -1.67
NEK3P51956 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.63□□□□□ -1.67
NEK3P51956 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 AC084783.1-201ENST00000565846 910 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.63□□□□□ -1.67
NEK3P51956 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
NEK3P51956 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 AC097065.2-201ENST00000608159 533 ntBASIC4.63□□□□□ -1.67
NEK3P51956 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 AC009237.17-201ENST00000618111 748 ntBASIC4.63□□□□□ -1.67
NEK3P51956 AP005019.3-201ENST00000620418 560 ntBASIC4.63□□□□□ -1.67
NEK3P51956 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.63□□□□□ -1.67
NEK3P51956 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.63□□□□□ -1.67
NEK3P51956 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NEK3P51956 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEK3P51956 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
NEK3P51956 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEK3P51956 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEK3P51956 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEK3P51956 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NEK3P51956 SNORA31-201ENST00000362607 130 ntBASIC4.62□□□□□ -1.67
NEK3P51956 RNU6-777P-201ENST00000364265 104 ntBASIC4.62□□□□□ -1.67
NEK3P51956 SDHCP2-201ENST00000398565 501 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.62□□□□□ -1.67
NEK3P51956 RAD23BP2-201ENST00000416003 1207 ntBASIC4.62□□□□□ -1.67
NEK3P51956 CHIAP3-201ENST00000423668 1133 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 MED14P1-201ENST00000430517 648 ntBASIC4.62□□□□□ -1.67
NEK3P51956 PRELID3BP10-201ENST00000431957 584 ntBASIC4.62□□□□□ -1.67
NEK3P51956 RPS6P12-201ENST00000432491 726 ntBASIC4.62□□□□□ -1.67
NEK3P51956 MTCYBP45-201ENST00000435243 565 ntBASIC4.62□□□□□ -1.67
NEK3P51956 SETP8-201ENST00000435341 628 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.62□□□□□ -1.67
NEK3P51956 CDC27P1-201ENST00000445384 715 ntBASIC4.62□□□□□ -1.67
NEK3P51956 BTF3P5-201ENST00000457252 467 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AC093278.1-201ENST00000494700 600 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms