Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC6A4P31645 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC6A4P31645 ZNF603P-201ENST00000405613 487 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 ELOCP19-201ENST00000411919 318 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC6A4P31645 OR8F1P-201ENST00000425243 930 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 RPL18P10-201ENST00000425606 538 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 COX6CP15-201ENST00000426313 211 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AL732292.1-201ENST00000426692 226 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 BX890604.2-201ENST00000427883 474 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 RPL36P19-201ENST00000430744 301 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC6A4P31645 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 GDI2P2-201ENST00000445131 608 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 NANOGNBP1-201ENST00000448444 480 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AL590365.1-201ENST00000450788 243 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 APOOP2-201ENST00000461561 539 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 RPL21P126-201ENST00000470049 478 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 RPS3AP17-201ENST00000472594 777 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC104563.1-201ENST00000476147 376 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 MTND6P6-201ENST00000478031 263 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 FTH1P24-201ENST00000503502 462 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC091133.4-201ENST00000511142 308 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 COX6CP8-201ENST00000522620 226 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AL133457.1-201ENST00000564251 987 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 ATP5J2P6-201ENST00000565203 266 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC6A4P31645 MIR3682-201ENST00000581338 84 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC022916.3-201ENST00000592961 742 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 VN1R79P-201ENST00000593540 513 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC022306.2-201ENST00000617563 647 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 AC022106.2-201ENST00000620114 757 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 AL672167.1-205ENST00000641112 3080 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC108751.5-201ENST00000492880 1336 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 LINC01355-201ENST00000566551 5444 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC6A4P31645 RPL32P3-201ENST00000359025 275 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RNA5SP447-201ENST00000363749 119 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 Y_RNA.248-201ENST00000364501 109 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 UBBP2-201ENST00000376781 231 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RNU6-769P-201ENST00000384407 104 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 EIF5P1-201ENST00000400019 1231 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RPL31P52-201ENST00000407532 367 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RPS3AP3-201ENST00000411933 242 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AC004690.1-201ENST00000418216 328 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AL590609.2-201ENST00000421430 368 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 USP9YP18-201ENST00000425912 695 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC6A4P31645 RPS3AP54-201ENST00000435535 734 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AL353572.1-201ENST00000442490 417 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 AL031584.1-201ENST00000447169 754 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AL591623.2-201ENST00000449978 222 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC6A4P31645 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 PABPC1P3-201ENST00000469174 459 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RPL31P50-201ENST00000471002 296 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 ACTR3P3-201ENST00000480448 893 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RPL9P6-201ENST00000492764 598 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
SLC6A4P31645 AC104057.1-201ENST00000515547 497 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 RN7SKP46-201ENST00000515942 234 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 MTCO2P4-201ENST00000517968 247 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
SLC6A4P31645 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC6A4P31645 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC6A4P31645 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC6A4P31645 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC6A4P31645 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC6A4P31645 MTCO3P24-201ENST00000572729 782 ntBASIC4.69□□□□□ -1.66
SLC6A4P31645 MIR4504-201ENST00000577413 92 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms