Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.86□□□□□ -1.63
PTX3P26022 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.86□□□□□ -1.63
PTX3P26022 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.86□□□□□ -1.63
PTX3P26022 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.86□□□□□ -1.63
PTX3P26022 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.86□□□□□ -1.63
PTX3P26022 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.86□□□□□ -1.63
PTX3P26022 RPL12P25-202ENST00000598100 674 ntBASIC4.86□□□□□ -1.63
PTX3P26022 AC025588.3-201ENST00000604182 274 ntBASIC4.86□□□□□ -1.63
PTX3P26022 LARP7P1-201ENST00000605576 316 ntBASIC4.86□□□□□ -1.63
PTX3P26022 AC022467.1-201ENST00000614738 749 ntBASIC4.86□□□□□ -1.63
PTX3P26022 AC037198.3-201ENST00000616754 526 ntBASIC4.86□□□□□ -1.63
PTX3P26022 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTX3P26022 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
PTX3P26022 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.86□□□□□ -1.63
PTX3P26022 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.86□□□□□ -1.63
PTX3P26022 AL596275.2-204ENST00000641628 552 ntBASIC4.86□□□□□ -1.63
PTX3P26022 AL596275.2-206ENST00000641957 626 ntBASIC4.86□□□□□ -1.63
PTX3P26022 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PTX3P26022 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTX3P26022 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.86□□□□□ -1.63
PTX3P26022 AC017104.4-201ENST00000636283 1592 ntBASIC4.86□□□□□ -1.63
PTX3P26022 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.86□□□□□ -1.63
PTX3P26022 AC090971.4-201ENST00000560291 1800 ntBASIC4.86□□□□□ -1.63
PTX3P26022 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTX3P26022 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PTX3P26022 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 AL592182.3-201ENST00000642132 3304 ntBASIC4.85□□□□□ -1.63
PTX3P26022 RNVU1-3-201ENST00000364313 161 ntBASIC4.85□□□□□ -1.63
PTX3P26022 Y_RNA.295-201ENST00000364918 102 ntBASIC4.85□□□□□ -1.63
PTX3P26022 RNU6-282P-201ENST00000365357 103 ntBASIC4.85□□□□□ -1.63
PTX3P26022 Y_RNA.409-201ENST00000383990 98 ntBASIC4.85□□□□□ -1.63
PTX3P26022 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 AL078599.1-201ENST00000402075 293 ntBASIC4.85□□□□□ -1.63
PTX3P26022 MTND4LP20-201ENST00000402379 270 ntBASIC4.85□□□□□ -1.63
PTX3P26022 RN7SKP16-201ENST00000410180 299 ntBASIC4.85□□□□□ -1.63
PTX3P26022 RNU2-15P-201ENST00000410692 191 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.85□□□□□ -1.63
PTX3P26022 AC119618.1-201ENST00000434191 222 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.85□□□□□ -1.63
PTX3P26022 USP9YP15-201ENST00000442391 422 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.85□□□□□ -1.63
PTX3P26022 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
PTX3P26022 BX276092.4-201ENST00000452056 248 ntBASIC4.85□□□□□ -1.63
PTX3P26022 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.85□□□□□ -1.63
PTX3P26022 COPS8P2-201ENST00000473228 627 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC069439.1-201ENST00000494739 167 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.85□□□□□ -1.63
PTX3P26022 SNORD116-26-201ENST00000516006 96 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.85□□□□□ -1.63
PTX3P26022 MTND1P35-201ENST00000526739 508 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AP000907.2-201ENST00000530827 353 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.85□□□□□ -1.63
PTX3P26022 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
PTX3P26022 AC068790.3-201ENST00000602988 553 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AC113194.1-201ENST00000606037 500 ntBASIC4.85□□□□□ -1.63
PTX3P26022 AP002360.3-201ENST00000607673 710 ntBASIC4.85□□□□□ -1.63
PTX3P26022 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.85□□□□□ -1.63
PTX3P26022 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.85□□□□□ -1.63
PTX3P26022 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.85□□□□□ -1.63
PTX3P26022 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 ZNF734P-201ENST00000419494 1534 ntBASIC4.85□□□□□ -1.63
PTX3P26022 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PTX3P26022 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PTX3P26022 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 AC009951.1-201ENST00000623674 2614 ntBASIC4.85□□□□□ -1.63
PTX3P26022 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTX3P26022 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.84□□□□□ -1.63
PTX3P26022 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTX3P26022 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTX3P26022 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.84□□□□□ -1.63
PTX3P26022 PABPC1P6-201ENST00000445594 1829 ntBASIC4.84□□□□□ -1.63
PTX3P26022 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTX3P26022 RNU4-1-201ENST00000363925 141 ntBASIC4.84□□□□□ -1.63
PTX3P26022 RNU6-877P-201ENST00000383868 107 ntBASIC4.84□□□□□ -1.63
PTX3P26022 SNORA20.2-201ENST00000383922 131 ntBASIC4.84□□□□□ -1.63
PTX3P26022 MIR1271-201ENST00000408537 86 ntBASIC4.84□□□□□ -1.63
PTX3P26022 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.84□□□□□ -1.63
PTX3P26022 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.84□□□□□ -1.63
PTX3P26022 AC004987.3-201ENST00000413879 771 ntBASIC4.84□□□□□ -1.63
PTX3P26022 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.84□□□□□ -1.63
PTX3P26022 DDX39BP1-205ENST00000422507 192 ntBASIC4.84□□□□□ -1.63
PTX3P26022 AC019097.1-201ENST00000424783 735 ntBASIC4.84□□□□□ -1.63
PTX3P26022 OR2AH1P-201ENST00000425717 928 ntBASIC4.84□□□□□ -1.63
PTX3P26022 AC137499.1-201ENST00000427602 88 ntBASIC4.84□□□□□ -1.63
PTX3P26022 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.84□□□□□ -1.63
PTX3P26022 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.84□□□□□ -1.63
PTX3P26022 BTF3P10-201ENST00000433415 495 ntBASIC4.84□□□□□ -1.63
PTX3P26022 RPS20P1-201ENST00000434853 354 ntBASIC4.84□□□□□ -1.63
PTX3P26022 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms