Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 OR4K8P-201ENST00000578842 1048 ntBASIC4.61□□□□□ -1.67
CD40P25942 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 AC008945.2-201ENST00000606056 604 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 AL031666.3-201ENST00000609320 1006 ntBASIC4.61□□□□□ -1.67
CD40P25942 MIR7155-201ENST00000615925 56 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC099669.2-201ENST00000616549 437 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC022140.2-201ENST00000623500 188 ntBASIC4.61□□□□□ -1.67
CD40P25942 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 AC000095.2-202ENST00000637415 154 ntBASIC4.61□□□□□ -1.67
CD40P25942 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CD40P25942 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CD40P25942 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
CD40P25942 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.61□□□□□ -1.67
CD40P25942 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.61□□□□□ -1.67
CD40P25942 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.61□□□□□ -1.67
CD40P25942 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CD40P25942 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.61□□□□□ -1.67
CD40P25942 AC083899.1-201ENST00000454465 3819 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC108467.2-201ENST00000617640 1597 ntBASIC4.61□□□□□ -1.67
CD40P25942 AC002525.1-201ENST00000624392 1622 ntBASIC4.61□□□□□ -1.67
CD40P25942 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.6□□□□□ -1.67
CD40P25942 RNU6-223P-201ENST00000362830 107 ntBASIC4.6□□□□□ -1.67
CD40P25942 SNORA17.1-201ENST00000362945 126 ntBASIC4.6□□□□□ -1.67
CD40P25942 RNU6-694P-201ENST00000364071 147 ntBASIC4.6□□□□□ -1.67
CD40P25942 Y_RNA.367-201ENST00000365544 101 ntBASIC4.6□□□□□ -1.67
CD40P25942 MIR765-201ENST00000390226 114 ntBASIC4.6□□□□□ -1.67
CD40P25942 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CD40P25942 PPIAP9-201ENST00000403866 498 ntBASIC4.6□□□□□ -1.67
CD40P25942 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.6□□□□□ -1.67
CD40P25942 RNU6-1068P-201ENST00000410958 103 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC016769.2-201ENST00000414815 475 ntBASIC4.6□□□□□ -1.67
CD40P25942 MTND4P25-201ENST00000441039 533 ntBASIC4.6□□□□□ -1.67
CD40P25942 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC234775.1-201ENST00000454247 670 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 RN7SL610P-201ENST00000463845 291 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC006512.1-201ENST00000468816 291 ntBASIC4.6□□□□□ -1.67
CD40P25942 AP000852.1-201ENST00000472460 573 ntBASIC4.6□□□□□ -1.67
CD40P25942 RPSAP50-201ENST00000481955 852 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC058823.1-201ENST00000485315 474 ntBASIC4.6□□□□□ -1.67
CD40P25942 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 AC135721.1-201ENST00000497954 479 ntBASIC4.6□□□□□ -1.67
CD40P25942 NIFKP7-201ENST00000503365 834 ntBASIC4.6□□□□□ -1.67
CD40P25942 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 SCARNA20.4-201ENST00000516969 131 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 CENPUP1-201ENST00000526649 1202 ntBASIC4.6□□□□□ -1.67
CD40P25942 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.6□□□□□ -1.67
CD40P25942 PHBP17-201ENST00000528576 541 ntBASIC4.6□□□□□ -1.67
CD40P25942 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.6□□□□□ -1.67
CD40P25942 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC024940.3-201ENST00000538551 316 ntBASIC4.6□□□□□ -1.67
CD40P25942 PDCD5P1-201ENST00000543528 309 ntBASIC4.6□□□□□ -1.67
CD40P25942 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.6□□□□□ -1.67
CD40P25942 MIR3691-201ENST00000578066 90 ntBASIC4.6□□□□□ -1.67
CD40P25942 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.6□□□□□ -1.67
CD40P25942 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 UBE2V2P2-201ENST00000587677 504 ntBASIC4.6□□□□□ -1.67
CD40P25942 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 BNIP3P10-201ENST00000605360 577 ntBASIC4.6□□□□□ -1.67
CD40P25942 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.6□□□□□ -1.67
CD40P25942 AL121992.2-201ENST00000606262 256 ntBASIC4.6□□□□□ -1.67
CD40P25942 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.6□□□□□ -1.67
CD40P25942 AL354950.2-201ENST00000617939 290 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC244100.1-202ENST00000621554 382 ntBASIC4.6□□□□□ -1.67
CD40P25942 AL161637.1-201ENST00000622380 412 ntBASIC4.6□□□□□ -1.67
CD40P25942 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC099654.5-201ENST00000636479 350 ntBASIC4.6□□□□□ -1.67
CD40P25942 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.6□□□□□ -1.67
CD40P25942 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 AC073136.1-201ENST00000449426 2884 ntBASIC4.6□□□□□ -1.67
CD40P25942 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CD40P25942 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.6□□□□□ -1.67
CD40P25942 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD40P25942 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms