Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TRBV1-201ENST00000476502 284 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SPTA1P02549 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.45□□□□□ -2.02
SPTA1P02549 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SPTA1P02549 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SPTA1P02549 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SPTA1P02549 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.45□□□□□ -2.02
SPTA1P02549 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SPTA1P02549 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SPTA1P02549 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SPTA1P02549 ZNF603P-201ENST00000405613 487 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 MTCO1P42-201ENST00000457379 726 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SPTA1P02549 RNA5SP480-201ENST00000516840 109 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 UBTFL10-201ENST00000528532 562 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC023043.2-201ENST00000589678 1026 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 VN1R9P-201ENST00000614184 867 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC009039.2-201ENST00000624524 529 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SPTA1P02549 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 RPL23AP4-201ENST00000427757 463 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.44□□□□□ -2.02
SPTA1P02549 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 MTND4P2-201ENST00000507767 1203 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.44□□□□□ -2.02
SPTA1P02549 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
SPTA1P02549 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.44□□□□□ -2.02
SPTA1P02549 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SPTA1P02549 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
SPTA1P02549 RNU1-73P-201ENST00000383971 164 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPTA1P02549 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.43□□□□□ -2.02
SPTA1P02549 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SPTA1P02549 AC092013.1-201ENST00000438795 332 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 MTND4LP16-201ENST00000440828 295 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AC011753.1-201ENST00000451001 220 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AC092045.1-201ENST00000495716 1231 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AC007954.1-201ENST00000554198 494 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AC141257.3-201ENST00000572906 215 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.43□□□□□ -2.02
SPTA1P02549 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPTA1P02549 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPTA1P02549 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SPTA1P02549 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SPTA1P02549 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.43□□□□□ -2.02
SPTA1P02549 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.43□□□□□ -2.02
SPTA1P02549 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.43□□□□□ -2.02
SPTA1P02549 Y_RNA.670-201ENST00000516255 105 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.43□□□□□ -2.02
SPTA1P02549 AC008507.1-201ENST00000587506 734 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 AC020895.1-201ENST00000595362 272 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.43□□□□□ -2.02
SPTA1P02549 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.43□□□□□ -2.02
SPTA1P02549 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SPTA1P02549 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SPTA1P02549 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.43□□□□□ -2.02
SPTA1P02549 AC027514.1-201ENST00000588561 1603 ntBASIC2.43□□□□□ -2.02
SPTA1P02549 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
SPTA1P02549 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPTA1P02549 RNA5SP213-201ENST00000391031 106 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 RPL21P75-201ENST00000396599 483 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 RPL21P1-201ENST00000399532 476 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 RPL21P28-201ENST00000401418 483 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AL592114.1-201ENST00000403842 483 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.42□□□□□ -2.02
SPTA1P02549 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AL049610.1-201ENST00000423374 372 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.42□□□□□ -2.02
SPTA1P02549 CYCSP20-201ENST00000473154 315 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 RPL9P6-201ENST00000492764 598 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 RPL21P16-201ENST00000495531 483 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 NARSP2-201ENST00000518524 679 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.42□□□□□ -2.02
SPTA1P02549 HPRT1P3-201ENST00000539521 576 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.42□□□□□ -2.02
SPTA1P02549 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.42□□□□□ -2.02
SPTA1P02549 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.42□□□□□ -2.02
SPTA1P02549 FAM35DP-201ENST00000323387 2712 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.42□□□□□ -2.02
SPTA1P02549 AC110754.1-201ENST00000399740 601 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SPTA1P02549 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.42□□□□□ -2.02
SPTA1P02549 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SPTA1P02549 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.42□□□□□ -2.02
SPTA1P02549 RPL31P13-201ENST00000484151 370 ntBASIC2.42□□□□□ -2.02
SPTA1P02549 OR5H3P-201ENST00000502817 919 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms