Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM1O15116 AC092470.1-201ENST00000546187 132 ntBASIC3.32□□□□□ -1.88
LSM1O15116 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM1O15116 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM1O15116 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM1O15116 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM1O15116 AL731537.2-201ENST00000561565 951 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AC095057.3-201ENST00000567102 1157 ntBASIC3.32□□□□□ -1.88
LSM1O15116 MIR4697-201ENST00000582977 78 ntBASIC3.32□□□□□ -1.88
LSM1O15116 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM1O15116 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
LSM1O15116 OR4H6P-202ENST00000603819 340 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AC099676.1-201ENST00000608886 657 ntBASIC3.32□□□□□ -1.88
LSM1O15116 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM1O15116 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM1O15116 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM1O15116 AC092435.3-201ENST00000565538 3654 ntBASIC3.32□□□□□ -1.88
LSM1O15116 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LSM1O15116 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
LSM1O15116 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.31□□□□□ -1.88
LSM1O15116 ZNF734P-201ENST00000419494 1534 ntBASIC3.31□□□□□ -1.88
LSM1O15116 MTND5P31-201ENST00000419366 1374 ntBASIC3.31□□□□□ -1.88
LSM1O15116 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM1O15116 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LSM1O15116 RNU6-374P-201ENST00000364146 108 ntBASIC3.31□□□□□ -1.88
LSM1O15116 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM1O15116 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM1O15116 RSL24D1P1-201ENST00000404972 493 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AL445189.1-201ENST00000405722 338 ntBASIC3.31□□□□□ -1.88
LSM1O15116 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
LSM1O15116 RNU6-77P-201ENST00000410554 91 ntBASIC3.31□□□□□ -1.88
LSM1O15116 RNA5SP344-201ENST00000411081 104 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM1O15116 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
LSM1O15116 GLRXP1-201ENST00000423261 334 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM1O15116 RPL21P110-201ENST00000433345 446 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM1O15116 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM1O15116 MTCO3P43-201ENST00000440974 771 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM1O15116 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 RPL21P18-201ENST00000469899 480 ntBASIC3.31□□□□□ -1.88
LSM1O15116 MTCO3P35-201ENST00000485582 781 ntBASIC3.31□□□□□ -1.88
LSM1O15116 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM1O15116 OR5H5P-201ENST00000503164 928 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC104108.1-201ENST00000509930 412 ntBASIC3.31□□□□□ -1.88
LSM1O15116 RNU6-362P-201ENST00000516736 90 ntBASIC3.31□□□□□ -1.88
LSM1O15116 SNORA76.2-201ENST00000517095 137 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM1O15116 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM1O15116 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM1O15116 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM1O15116 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM1O15116 AC010653.1-201ENST00000571108 881 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC006116.10-201ENST00000591836 581 ntBASIC3.31□□□□□ -1.88
LSM1O15116 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 AL391497.1-201ENST00000608671 547 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AP004247.3-201ENST00000608682 624 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC020658.4-201ENST00000613987 684 ntBASIC3.31□□□□□ -1.88
LSM1O15116 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM1O15116 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LSM1O15116 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 AC008432.1-201ENST00000615912 1320 ntBASIC3.3□□□□□ -1.88
LSM1O15116 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LSM1O15116 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RNU6-441P-201ENST00000384545 106 ntBASIC3.3□□□□□ -1.88
LSM1O15116 ATF1P1-201ENST00000406040 927 ntBASIC3.3□□□□□ -1.88
LSM1O15116 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
LSM1O15116 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM1O15116 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM1O15116 AL009174.1-201ENST00000426577 416 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC006548.1-201ENST00000427470 102 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC093151.1-201ENST00000427711 313 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RPS7P2-201ENST00000435134 607 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RPL21P2-201ENST00000440049 481 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM1O15116 NOTCH2P1-201ENST00000443481 624 ntBASIC3.3□□□□□ -1.88
LSM1O15116 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC068587.1-201ENST00000483613 781 ntBASIC3.3□□□□□ -1.88
LSM1O15116 MTND3P24-201ENST00000506306 329 ntBASIC3.3□□□□□ -1.88
LSM1O15116 HMGN1P11-201ENST00000508668 303 ntBASIC3.3□□□□□ -1.88
LSM1O15116 MTCO3P44-201ENST00000510977 541 ntBASIC3.3□□□□□ -1.88
LSM1O15116 FABP5P12-201ENST00000515543 389 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RN7SKP116-201ENST00000516902 319 ntBASIC3.3□□□□□ -1.88
LSM1O15116 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM1O15116 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 AL669831.4-202ENST00000590817 238 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms