Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AGGF1P8-201ENST00000562979 1000 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 HMGB2P1-201ENST00000591146 634 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AL022154.1-201ENST00000604698 785 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AP002360.3-201ENST00000607673 710 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC091834.1-201ENST00000614543 472 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 U4.5-201ENST00000617137 123 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC021242.1-201ENST00000507315 2035 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 AC139769.1-204ENST00000472297 1931 ntBASIC5.29□□□□□ -1.56
PTPDC1A2A3K4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 ARF4P3-201ENST00000397387 509 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 EIF5P1-201ENST00000400019 1231 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC004690.1-201ENST00000418216 328 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RPL7AP25-201ENST00000423357 805 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 CHIAP3-201ENST00000423668 1133 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RPL12P34-201ENST00000424532 479 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 MRPS10P2-201ENST00000431226 381 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 MTND5P14-201ENST00000441481 1267 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC239809.1-201ENST00000450470 217 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 OR6K1P-201ENST00000456766 971 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RPL21P126-201ENST00000470049 478 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC087879.1-201ENST00000474343 374 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC005726.1-201ENST00000494679 427 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 KCTD9P2-201ENST00000512203 1013 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RNU6-506P-201ENST00000516553 94 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 OR5M7P-201ENST00000526140 972 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 ZNF519P2-201ENST00000557032 169 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 LARP7P2-201ENST00000575306 125 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC110743.1-201ENST00000584870 478 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC005191.1-201ENST00000603950 358 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC010201.1-201ENST00000605051 540 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC091979.2-201ENST00000607514 214 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 AC091905.2-201ENST00000623143 306 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.28□□□□□ -1.56
PTPDC1A2A3K4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 AC025031.4-201ENST00000621248 3271 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 CPHL1P-201ENST00000461341 3407 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 AC092435.4-201ENST00000623012 4159 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 OR11H4-201ENST00000315409 1082 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 RPL23AP57-201ENST00000332361 466 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 RNU6-289P-201ENST00000364093 107 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 AC068538.1-201ENST00000376856 336 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 RNU6-952P-201ENST00000391164 108 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 DHFRP6-201ENST00000401776 268 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 AL049693.1-201ENST00000402760 611 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 ZNF603P-201ENST00000405613 487 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 RNU4-25P-201ENST00000410569 230 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 TPMTP2-201ENST00000414372 726 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 Z97055.1-201ENST00000419730 712 ntBASIC5.27□□□□□ -1.57
PTPDC1A2A3K4 AL592293.2-201ENST00000422292 996 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms