Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 YPEL5P3-201ENST00000547227 352 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AL360157.1-201ENST00000565962 87 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC110741.2-201ENST00000605278 268 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC012603.1-201ENST00000606424 528 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC105429.2-201ENST00000610567 517 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AL139089.1-201ENST00000620372 975 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 FAM35DP-201ENST00000323387 2712 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC109315.1-201ENST00000584143 1347 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 HMGB1P5-201ENST00000255320 642 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RNU1-64P-201ENST00000365443 163 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RN7SKP177-201ENST00000410567 355 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 Z97055.1-201ENST00000419730 712 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MRPS36P1-201ENST00000421291 307 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 NPM1P34-201ENST00000428821 893 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC005345.1-201ENST00000431868 217 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 KCTD10P1-201ENST00000434203 625 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MTND3P1-201ENST00000441336 220 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RAB11AP1-201ENST00000442978 646 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MTCYBP3-201ENST00000445588 1137 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RNU7-125P-201ENST00000458760 62 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 SNORD108-201ENST00000459332 71 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RN7SL132P-201ENST00000478131 296 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 ACTG1P13-201ENST00000486987 1043 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 WBP1LP4-201ENST00000505043 344 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC020593.1-201ENST00000507399 299 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 HSPE1P23-201ENST00000509838 286 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC109471.1-201ENST00000511631 612 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 RNA5SP135-201ENST00000517019 125 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 NDUFA5P2-201ENST00000519723 344 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC125611.1-201ENST00000549563 229 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 HIGD1AP17-201ENST00000554576 276 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC007424.1-203ENST00000554613 687 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC002400.1-201ENST00000569310 726 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 VN1R90P-201ENST00000595717 726 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL031281.1-201ENST00000604049 488 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AP003973.1-201ENST00000604639 691 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC106791.2-201ENST00000604680 391 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL158042.1-201ENST00000605338 460 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 VIS1.1-201ENST00000610517 203 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 uc_338.32-201ENST00000615087 172 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AL591424.2-201ENST00000617023 128 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC073348.1-201ENST00000623002 331 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC079248.2-201ENST00000623779 326 ntBASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX9Q9Y5X1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.21□□□□□ -1.73
SNX9Q9Y5X1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNX9Q9Y5X1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AL391994.1-201ENST00000254724 282 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 OR52E6-202ENST00000379946 954 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 SNORD116-23-201ENST00000384645 92 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms