Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 RPA2P1-201ENST00000556557 721 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MIR4675-201ENST00000577898 77 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MIR4293-201ENST00000584305 78 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MIR6085-201ENST00000618314 110 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL589994.2-201ENST00000621124 579 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 SNX18P12-201ENST00000624821 759 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL355480.1-201ENST00000629041 99 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 GTF2IP4-201ENST00000453092 2054 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC232271.1-201ENST00000602455 2715 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 SNORA16.2-201ENST00000390991 127 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 OSTCP4-201ENST00000424397 449 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RPL21P2-201ENST00000440049 481 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL359672.1-201ENST00000442302 409 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RPL9P32-201ENST00000464118 620 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RPL39P38-201ENST00000467018 153 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC090686.1-201ENST00000481577 749 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC108860.1-201ENST00000484521 383 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RPL7P51-201ENST00000490532 749 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RN7SL101P-201ENST00000496350 279 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 HMGB1P21-201ENST00000502313 581 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 SUB1P3-201ENST00000564581 315 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 NF1P5-201ENST00000588287 448 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC025857.2-201ENST00000602711 238 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC025588.3-201ENST00000604182 274 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL158032.1-201ENST00000605401 106 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 HMGN2P28-201ENST00000606102 262 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC015982.1-201ENST00000608113 465 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC074141.1-201ENST00000588129 2995 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 AC140134.1-201ENST00000511830 3544 ntBASIC5.85□□□□□ -1.47
HRH3Q9Y5N1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC074029.4-201ENST00000624796 1859 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RNA5SP433-201ENST00000364491 114 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RNU6-946P-201ENST00000383878 107 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RNA5SP122-201ENST00000384457 108 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RPL21P1-201ENST00000399532 476 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 SNORA77.2-201ENST00000408571 112 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 U3.43-201ENST00000410734 213 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC243428.1-201ENST00000421099 264 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC073410.1-201ENST00000435125 589 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC022034.3-201ENST00000471393 478 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms