Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MIR5186-201ENST00000577504 120 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL031775.1-201ENST00000607014 887 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL391497.1-201ENST00000608671 547 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC012360.2-201ENST00000609349 391 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL136295.6-201ENST00000610486 658 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC009237.17-201ENST00000618111 748 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AP002907.1-201ENST00000606361 1430 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKP3Q9Y446 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL122126.1-201ENST00000546905 1318 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKP3Q9Y446 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNA5SP52-201ENST00000362448 134 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNU1-14P-201ENST00000362759 152 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNU4-21P-201ENST00000362802 126 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL024474.1-201ENST00000404655 591 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL355379.1-201ENST00000405542 640 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNA5SP36-201ENST00000410197 133 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RN7SKP235-201ENST00000410662 305 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 RPL23AP46-201ENST00000438548 490 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL117351.1-201ENST00000438864 766 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 COX6CP2-201ENST00000444980 225 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 HMGB3P21-201ENST00000452483 547 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC009963.2-201ENST00000453431 138 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 RPL30P9-201ENST00000465586 330 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC116337.2-201ENST00000477662 156 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RPS29P19-201ENST00000479709 171 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 FAM172BP-201ENST00000487497 1089 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNF138P1-201ENST00000502765 546 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 TMEM251P1-201ENST00000503717 318 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 PARP4P3-201ENST00000510265 317 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 PPBPP1-201ENST00000510807 373 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 KCTD9P2-201ENST00000512203 1013 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 SNORD116-26-201ENST00000516006 96 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC060788.1-201ENST00000521318 469 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 PCMTD1P2-201ENST00000565017 355 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 LARP7P2-201ENST00000575306 125 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AP001004.1-201ENST00000582468 324 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 MAGOH2P-202ENST00000584384 429 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 RSL24D1P11-201ENST00000591045 491 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 IPO5P1-202ENST00000600039 287 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC073544.2-201ENST00000601155 540 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL445363.3-201ENST00000623080 671 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 FAM157B-203ENST00000639350 358 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKP3Q9Y446 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 AC105074.1-201ENST00000623380 3095 ntBASIC4.26□□□□□ -1.73
PKP3Q9Y446 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PKP3Q9Y446 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PKP3Q9Y446 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.26□□□□□ -1.73
PKP3Q9Y446 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.25□□□□□ -1.73
PKP3Q9Y446 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PKP3Q9Y446 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.25□□□□□ -1.73
PKP3Q9Y446 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PKP3Q9Y446 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.25□□□□□ -1.73
PKP3Q9Y446 OR10J6P-201ENST00000289731 930 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 U3.4-201ENST00000363352 213 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 RNA5SP366-201ENST00000365454 123 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PKP3Q9Y446 SNORA56-201ENST00000383966 129 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 AC016769.3-201ENST00000396562 315 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 ARF4P3-201ENST00000397387 509 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 AL121834.1-202ENST00000404494 277 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 RNU4-25P-201ENST00000410569 230 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.25□□□□□ -1.73
PKP3Q9Y446 AL807761.1-201ENST00000417622 171 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 RPL7P30-201ENST00000420888 709 ntBASIC4.25□□□□□ -1.73
PKP3Q9Y446 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.25□□□□□ -1.73
PKP3Q9Y446 AL592293.2-201ENST00000422292 996 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms