Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU4-65P-201ENST00000410473 140 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU6-193P-201ENST00000410977 107 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 PDCL2P1-201ENST00000419302 352 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 BEND7P1-201ENST00000422058 457 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC016712.1-201ENST00000431088 378 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RPL36AP6-201ENST00000435770 321 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ACA64.1-201ENST00000459171 127 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC094085.1-201ENST00000468914 584 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RPL21P103-201ENST00000479921 488 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RN7SL570P-201ENST00000484405 292 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNU4-29P-201ENST00000515943 174 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RN7SKP219-201ENST00000516825 296 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RNA5SP230-201ENST00000517039 122 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC103843.2-201ENST00000530523 682 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC023050.3-201ENST00000541142 333 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC096996.1-201ENST00000563813 325 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 RPS3AP23-202ENST00000574601 686 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 MIR4775-201ENST00000581168 75 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC090607.5-201ENST00000615692 224 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC079684.1-201ENST00000621405 437 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 FRG1KP-201ENST00000623592 341 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC099654.10-201ENST00000640395 161 ntBASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VTI1BQ9UEU0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 ASNSP3-201ENST00000451989 1306 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RNU1-150P-201ENST00000362491 162 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 U3.7-201ENST00000363668 216 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RN7SKP6-201ENST00000364795 319 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 SNORD81.2-201ENST00000365153 76 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RNU6-332P-201ENST00000391193 108 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RN7SKP159-201ENST00000410657 292 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RN7SKP263-201ENST00000411194 309 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 HMGN1P20-201ENST00000411849 300 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 EEF1A1P40-201ENST00000412883 573 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC007390.1-201ENST00000415722 356 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RPS7P15-201ENST00000415804 584 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC009161.1-201ENST00000417306 376 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RPL7P12-201ENST00000446719 750 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 SNORD97-201ENST00000459187 142 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RPS15AP36-201ENST00000492022 382 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RN7SL57P-201ENST00000493687 290 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 NDUFA5P12-201ENST00000503796 343 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 FGF7P4-201ENST00000509595 295 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 SUMO2P20-201ENST00000520803 283 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 OR1F2P-201ENST00000570470 933 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 MIR4660-201ENST00000583549 74 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 VN1R80P-201ENST00000597126 338 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 MIR6130-201ENST00000619419 109 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC090617.10-201ENST00000624308 134 ntBASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1BQ9UEU0 AC244517.1-201ENST00000606030 2086 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms