Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AP001025.2-201ENST00000490908 477 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC090572.1-201ENST00000519251 160 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 RPL7P20-201ENST00000520308 745 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AP005403.1-201ENST00000579720 229 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC9.27□□□□□ -0.92
TRIM41Q8WV44 AC090337.1-201ENST00000579651 2074 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MIR133B-201ENST00000362210 119 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RNU4-70P-201ENST00000384579 139 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RN7SKP222-201ENST00000410651 315 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RPS12P24-201ENST00000412619 387 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC006548.1-201ENST00000427470 102 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AL137792.2-201ENST00000443484 235 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC105399.1-202ENST00000447303 205 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC107399.1-201ENST00000451226 265 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MRPS31P2-201ENST00000451581 518 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RPL21P99-201ENST00000480369 423 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 NIP7P2-201ENST00000485801 544 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 EEF1A1P25-201ENST00000495704 1267 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RN7SKP295-201ENST00000517264 153 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RANP9-201ENST00000519957 271 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 OR5B10P-201ENST00000532869 642 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MIR4680-201ENST00000580906 66 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AP001029.3-201ENST00000588063 596 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AL365434.2-201ENST00000607979 234 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MIR6780A-201ENST00000615089 68 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 CR381572.1-201ENST00000625098 102 ntBASIC9.27□□□□□ -0.93
TRIM41Q8WV44 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
TRIM41Q8WV44 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 Y_RNA.148-201ENST00000363557 117 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 RNU4-1-201ENST00000363925 141 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 SNORA67-201ENST00000384423 137 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 HMGB1P17-201ENST00000403495 628 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 RNU6-985P-201ENST00000410182 104 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AL160004.2-201ENST00000432935 350 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AL138799.3-201ENST00000438968 350 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 RPL23AP71-201ENST00000470966 469 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 HMGB1P30-201ENST00000492455 606 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 RNU6-410P-201ENST00000517006 107 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC024220.1-201ENST00000603675 484 ntBASIC9.26□□□□□ -0.93
TRIM41Q8WV44 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TRIM41Q8WV44 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 RNA5SP332-201ENST00000391063 115 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL121834.1-202ENST00000404494 277 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 RPL31P52-201ENST00000407532 367 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms