Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNORD114-30-201ENST00000364448 72 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 RNU6-805P-201ENST00000365643 106 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC021205.1-201ENST00000468797 348 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC126121.1-201ENST00000482313 553 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 MTND4P2-201ENST00000507767 1203 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 MIR6733-201ENST00000635723 61 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 RNU6-55P-201ENST00000411092 107 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 RNU6-954P-201ENST00000411355 107 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 RANP4-201ENST00000413361 655 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC009969.1-201ENST00000438726 172 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 RN7SKP244-201ENST00000516513 307 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 OR5G4P-201ENST00000525251 760 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC098826.3-201ENST00000603823 466 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC087385.1-201ENST00000475062 312 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 TRAV31-201ENST00000502780 342 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 AC068446.3-201ENST00000555285 382 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ALMS1Q8TCU4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 RNA5SP289-201ENST00000362332 137 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC099063.3-201ENST00000642066 185 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 RNVU1-3-201ENST00000364313 161 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AL390023.1-201ENST00000428836 262 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC011242.1-201ENST00000433596 1158 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 CYCSP20-201ENST00000473154 315 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 SEC11B-201ENST00000518383 499 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AP001646.1-201ENST00000527936 915 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC243972.3-201ENST00000539655 198 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC092326.2-201ENST00000624772 1561 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC092079.1-201ENST00000558620 1985 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 ATP5F1P7-201ENST00000567330 760 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AL392112.1-201ENST00000605115 829 ntBASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ALMS1Q8TCU4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 U8.2-201ENST00000363156 134 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC122134.1-201ENST00000565664 1104 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 OR10AB1P-202ENST00000641219 1686 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AL592494.2-201ENST00000425455 1548 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 RPS4XP7-201ENST00000406274 780 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 HMGB3P18-201ENST00000406327 590 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 RPS27P29-201ENST00000463110 252 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 AC073476.4-201ENST00000628409 72 ntBASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ALMS1Q8TCU4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms