Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD3Q7Z407 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AL590290.1-201ENST00000405336 380 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 RNA5SP320-201ENST00000516263 124 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC008507.1-201ENST00000587506 734 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 LINC00901.1-201ENST00000617252 152 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 OR4G1P-202ENST00000641173 1788 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AL592494.2-201ENST00000425455 1548 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 RPL29P29-201ENST00000448725 423 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC003982.1-202ENST00000469928 248 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC113430.1-201ENST00000506872 718 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 GOLGA5P1-201ENST00000507317 980 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC021146.1-201ENST00000511202 716 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC009318.2-201ENST00000610917 651 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 AC073869.7-201ENST00000640874 297 ntBASIC1.84□□□□□ -2.11
CSMD3Q7Z407 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CSMD3Q7Z407 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 ZNF72P-201ENST00000425869 1908 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 RN7SKP44-201ENST00000363602 316 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 Y_RNA.355-201ENST00000365462 98 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 RN7SKP58-201ENST00000411010 305 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 Z99127.2-201ENST00000441426 334 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 TRIM60P18-201ENST00000441518 828 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 AP001317.1-201ENST00000531194 960 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 TRAV37-201ENST00000553906 342 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 CR381653.2-201ENST00000624041 768 ntBASIC1.84□□□□□ -2.12
CSMD3Q7Z407 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CSMD3Q7Z407 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 MIR2276-201ENST00000516886 89 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 MIR148B-201ENST00000362252 99 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 U3.11-201ENST00000364476 212 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RPL7P10-201ENST00000417407 739 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RPL31P45-201ENST00000419532 356 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RPS12P5-201ENST00000423449 371 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC108860.1-201ENST00000484521 383 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC116337.1-201ENST00000509680 687 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC007938.3-201ENST00000604965 623 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RMST_9.1-201ENST00000619945 193 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC092608.2-201ENST00000624427 218 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AC092079.1-201ENST00000558620 1985 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 SNORA46-201ENST00000384762 135 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 RPL7P52-201ENST00000449200 742 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 DNAJC19P1-201ENST00000455312 319 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CSMD3Q7Z407 SPATA2P1-201ENST00000431223 2055 ntBASIC1.83□□□□□ -2.12
CSMD3Q7Z407 SNORD56.3-201ENST00000363507 71 ntBASIC1.82□□□□□ -2.12
CSMD3Q7Z407 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms